| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0293 |
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| Symbol | |
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| ID | 5867990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 340499 |
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| End bp | 342595 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641545373 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001666542 |
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| Protein GI | 167031311 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGTAC CCTGCCGCCT TTCACCCCTG ACGCTTGGCC TGTCGCTGCT GTTCAGCGTC
GACCTGGCGA GTGCCGCCAC CACCACGCTG CCAGAGTCGT CGATTACCGC CGACAGCGAG
CGCGAGAAGG ACAACCCACG GGTCAAGGAG GTAAGCACCG CCACCCGCAC CTCGACGCCG
GTGCGCTATG TCCCCCAGGC CATCGACACG GTGAAGACCG TCAACGTGCT GGATTACGGC
AGCAACACCT TGGGCAAGGC GCTGGAGGGC ATCCCCAACG TCAGCAGCGG CGCCGATACC
CGCTTCGACA GTGTGCGCAT CCGCGGCTTC GAGGCCAGCA ACGACTTTTA CCTGGACGGC
ATTCGTGACG ACAGCCAGTA CATCCGCGAC CTGCACAACA TCGAGCGGGT CGAGGTGCTG
AAGGGGCCTG CGGCGGTGCT ATACGGCCGT GGCAGCCAGG GCGGTATCGT CAACCGGGTC
AGCAAGGCAC CGGAGCCGGG CCGACGCTCG ACCCTCGAAG CGCAGGCCGG CAGTGAAGAC
CTGCGCAGCC TGTATGCCGA CCTCAGCGCC GACCCCAGCG ACACCGTCAG CCTGCGCCTG
AACATGGGCA ACCAGGACAA CAACAGCTTC CGCGATGGTG TTCACGGCAG CCGCCAACTG
TTCGCCCCGT CGATCAGCTG GCAGATCAAC CCCGACCTGA ACTGGCTGGT GCAATACGAA
TACAGCCGTT ACAACCGCAC ACCCGACCGG GGTATCCCCG GGGTCAACGG CCGCCCGGCC
GACGTGAGCC GCGGCAACAC CTACGGTGAC CCGCGCGACT ATATCGATGA TCACGCCCAG
TCCCTGCGCT CACGCCTGAA CTACCAGCTG AACGAAACCT GGCAGCTGCG CCATACCCTG
GGCCTGTTCA AGCTCGACAG TGAGTTCGAC AACACCTATG TCGTCGGCTA CAACGCCGGC
ACCAACACCG TGACCCGCCA GCGTTGGCAG CAGGACCTCA ACACCCGCAA CCTATTCAAT
AACCTGGAGG CCGAGGGCGA CTTCGACACC CTGGGGTTGG AACACAAGCT GCTTGTAGGC
CTGGAGTTCG GTAATCAGCG GCGTGACCCT CTGCTGTACA CCGCCTTGCC TGTTGCGAAG
GGTGGCCAGG CGGTTCCAGG CCTGGACCTG AACAACCCCG ACCGCAGCCA GCAGCACAAT
GGCCCTATGA CGGTGTCGAG TGACAACCAC ACCGTGGTCG ATAGCCGTGG CCTTTACCTG
CAGGACCAGA TCCGCCTGAA CGATCAGTGG CAGATCCTTG CTGGGGTACG CTTCGACCAA
TTCGATGTGC AAACCACCAA CAAAGATGGC GTGCGCGAAC CACAGGACAG CAACAGCACC
AGCCCGCGCC TGGGCGTGGT CTACACGCCG TGGCGCGACC ATTCGTTCTA CGCTTCGTGG
AGCAAGACCT TTTCGCCGGT GGGCGGCGGC CTGATCGGCA TCACTCCAGA TGCGCCGGGC
AACGGCAACG ACGCCAAGCC GGAAGAAACC CGTCAAAAGG AAATCGGCGT GAAGAGCGAC
TGGCTCGACC AGCGCCTGAC CACCACCTTG GCCATTTACG AGCTGGAGCT GTACAACCGC
CGCACCCGCG ACCCGCTGAT CCCGGAAAAC ATTTTGCTCA GCGGCCTGCA GCGTTCGCGC
GGCATCGAGC TGACCGCCAC CGGCAATATC GTTGGCAACT GGTATGTACG CGGCGGCATC
GGCCTGCAGG ACGCCATCAT CGTCAAGGAC AACAACGGCC AGGAAGGCAA CCGCATCAAT
GACGTGGCCA AGCGCAACGG CAGCTTGTTC GTGACCTGGA AGCCAGAGCT GGGCTGGTAC
GCTGAAACCG GCCTGACGTT GGTGGGTGAA CGTTATGCGG ACAACCAGAA CACCACGGTA
TTGCCGGGGT ATGGCCGTTG GGATGCATTG GCGGGGTACC GCACCCATGA CTGGGATGTA
CGGGCGGCGC TGAGCAACAT TGCCGACAAG ACCTACTACA GCTCAGCGAC CAGTGCGGCG
CAGATTCAGG TAGGGGACCC GCGTAGCCTG GTGGTGACGG GTAGCTACAG CTTCTGA
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| Protein sequence | MLVPCRLSPL TLGLSLLFSV DLASAATTTL PESSITADSE REKDNPRVKE VSTATRTSTP
VRYVPQAIDT VKTVNVLDYG SNTLGKALEG IPNVSSGADT RFDSVRIRGF EASNDFYLDG
IRDDSQYIRD LHNIERVEVL KGPAAVLYGR GSQGGIVNRV SKAPEPGRRS TLEAQAGSED
LRSLYADLSA DPSDTVSLRL NMGNQDNNSF RDGVHGSRQL FAPSISWQIN PDLNWLVQYE
YSRYNRTPDR GIPGVNGRPA DVSRGNTYGD PRDYIDDHAQ SLRSRLNYQL NETWQLRHTL
GLFKLDSEFD NTYVVGYNAG TNTVTRQRWQ QDLNTRNLFN NLEAEGDFDT LGLEHKLLVG
LEFGNQRRDP LLYTALPVAK GGQAVPGLDL NNPDRSQQHN GPMTVSSDNH TVVDSRGLYL
QDQIRLNDQW QILAGVRFDQ FDVQTTNKDG VREPQDSNST SPRLGVVYTP WRDHSFYASW
SKTFSPVGGG LIGITPDAPG NGNDAKPEET RQKEIGVKSD WLDQRLTTTL AIYELELYNR
RTRDPLIPEN ILLSGLQRSR GIELTATGNI VGNWYVRGGI GLQDAIIVKD NNGQEGNRIN
DVAKRNGSLF VTWKPELGWY AETGLTLVGE RYADNQNTTV LPGYGRWDAL AGYRTHDWDV
RAALSNIADK TYYSSATSAA QIQVGDPRSL VVTGSYSF
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