| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0290 |
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| Symbol | |
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| ID | 5867987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 338116 |
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| End bp | 338661 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641545370 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001666539 |
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| Protein GI | 167031308 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCA TCCCTACCGC AATCCCTGAA GTACTGATCA TCGAACCGAA AGTGTTCGGT
GACAGCCGTG GTTTTTTCTT CGAGGCATTC AACGCCCGTG AGTTCGCACG GCAAACCGGC
GTGAACGTGG AATTCGTCCA GGACAACCAC TCGCGCTCCA TCAAGGGCGT GCTGCGTGGG
CTGCACTACC AGGTGGCAAA CACCCAGGGC AAACTGGTGC GCGTGGTGCA TGGCGAGATC
CGCGATATTG CCGTGGATGT GCGCAAAAGC TCGCCAACCT TTGGCCAATG GGTTGCCGTG
CACCTGTCGG CCGACAACCA CCGCCAACTG TGGATTCCAC CCGGTTTTGC CCACGGTTTT
GCGGTGATGA GCGAATCGGC CGAATTCCTC TACAAGACCA CCGACTACTA CAACCCCGGC
GCCGACCGCT GCATCCGCTG GGACGACCCG CAACTGGGCA TCGACTGGGG GCTACGGCAG
CCACCGGTAC TGTCGGACAA GGACAAGGTC GGCCTGCCAC TGGCAGAGGC GGAACTGCTC
CCTTAA
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| Protein sequence | MNIIPTAIPE VLIIEPKVFG DSRGFFFEAF NAREFARQTG VNVEFVQDNH SRSIKGVLRG
LHYQVANTQG KLVRVVHGEI RDIAVDVRKS SPTFGQWVAV HLSADNHRQL WIPPGFAHGF
AVMSESAEFL YKTTDYYNPG ADRCIRWDDP QLGIDWGLRQ PPVLSDKDKV GLPLAEAELL
P
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