| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0238 |
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| Symbol | |
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| ID | 5867935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 277484 |
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| End bp | 278761 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545318 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001666487 |
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| Protein GI | 167031256 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA CCAACGAATC CTTGATGCAA CGTCGTGTAG CTGCCGTCCC ACGTGGCGTT
GGCCAGATCC ACCCGATCTT CGTCGACACC GCGAAGAACT CGACTGTGAT CGACGTTGAA
GGCCGCGAAC TGATCGACTT CGCCGGCGGC ATCGCAGTGC TGAACACCGG CCACCTGCAC
CCGAAAGTGG TTGCGGCCGT GCAAGAGCAA CTGACCAAGG TCAGCCACAC CTGCTTCCAG
GTACTGGCTT ACGAACCTTA CGTAGAGCTG TGCGAAAAGA TCAACAAGCT GGTCCCAGGC
GACTTCGACA AGAAGACCCT GCTGGTCACC ACCGGCTCCG AAGCCGTTGA AAACGCCGTG
AAGATCGCCC GTGCCGCCAC CGGCCGCGCT GGCGTCATCG CCTTCACCGG CGGCTACCAC
GGCCGTACCA TGATGACCCT GGGCCTGACC GGCAAGGTTG TGCCGTACTC CGCTGGCATG
GGCCTGATGC CAGGCGGTAT CTTCCGCGCC CTGTTCCCGA GCGAACTGCA CGGTATCAGC
GTTGACGACG CCATCGCTTC GGTCGAGCGC ATCTTCAAGA ACGACGCCGA GCCACGCGAC
ATCGCCGCGA TCATCCTCGA GCCAGTACAA GGCGAAGGCG GCTTCCTGCC AGCGCCTAAA
GAGCTGATGA AGCGCCTGCG CGCCCTGTGC GACCAGCACG GCATCCTGCT GATCGCCGAC
GAAGTACAGA CTGGCGCTGG CCGTACCGGC ACCTTCTTCG CCATGGAACA GATGGGCGTT
GCGCCTGACC TGACCACCTT CGCCAAATCC ATCGCTGGCG GCTTCCCGCT GGCCGGTGTG
TGCGGCAAGG CCGAGTACAT GGACGCGATC GCTCCGGGCG GCCTGGGCGG CACCTACGCC
GGTTCGCCGA TCGCTTGCGC CGCGGCCCTG GCCGTGATCG AAGTGTTCGA AGAAGAAAAA
CTGCTGGACC GCAGCAAGGC TGTGGGTGAG CGCCTGACCA CCGGCCTGCG CGAAATCCAG
AAGAAGCACC CGATCATCGG CGACGTCCGT GGTCTGGGCT CGATGATCGC TGTTGAAGTC
TTCGAGAAAG GCACTCACAC CCCGAACGCT GCTGCTGTTG GCCAGGTGGT TGCCAAGGCA
CGCGAAAAGG GTCTGATCCT GCTGTCCTGC GGCACCTACG GCAACGTTCT GCGTATCCTG
GTACCGCTGA CTGCCGAAGA CGCACTGCTG GACAAAGGTC TGGCCATCAT CGAAGAGTGC
TTCGCTGAAC TCGCTTGA
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| Protein sequence | MSKTNESLMQ RRVAAVPRGV GQIHPIFVDT AKNSTVIDVE GRELIDFAGG IAVLNTGHLH
PKVVAAVQEQ LTKVSHTCFQ VLAYEPYVEL CEKINKLVPG DFDKKTLLVT TGSEAVENAV
KIARAATGRA GVIAFTGGYH GRTMMTLGLT GKVVPYSAGM GLMPGGIFRA LFPSELHGIS
VDDAIASVER IFKNDAEPRD IAAIILEPVQ GEGGFLPAPK ELMKRLRALC DQHGILLIAD
EVQTGAGRTG TFFAMEQMGV APDLTTFAKS IAGGFPLAGV CGKAEYMDAI APGGLGGTYA
GSPIACAAAL AVIEVFEEEK LLDRSKAVGE RLTTGLREIQ KKHPIIGDVR GLGSMIAVEV
FEKGTHTPNA AAVGQVVAKA REKGLILLSC GTYGNVLRIL VPLTAEDALL DKGLAIIEEC
FAELA
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