| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0235 |
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| Symbol | |
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| ID | 5867932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 271537 |
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| End bp | 273873 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641545315 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001666484 |
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| Protein GI | 167031253 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGAC TTTCCCGTTG GCCTGCGCGC GCGTCGCGTT TCACCTTGCA ACCCTTGGCC
GCTGGCGTGC TGCTGGCGGC GTCCTCCGGA AGCTTTGCCG AAGCGCCGGT CAGTGCCACC
CCGGCGGTGG AACAGGAAGC CAAGCTCGGC ACCGTCACGG TCAATGCTCG TCGCCGGGAA
GAAACCGCGC AAAGCGTGCC CACGCCGATC AGCGTGTTGG ACAGCGAAAC CCTGGAAACT
CAGCGCATCT ACCGCGTGCA GGATTTGCAA CAGTTGGTGC CCAGCACCAA CGTCGCTTAT
GTGCATGCGC GCCAGTCGAG CATCTCGATC CGTGGCCTGG GTAACAACCC GGCCAGCGAC
GGCTTGGAAG GCAGCGTTGG TATCTACCTG GACAACGTCT ACCTCGGCCG CCCCGGCATG
GCGGTATTCG ACCTGCTGGA TGTCGAGCAG CTGGAAGTGC TGCGCGGCCC GCAGGGCACG
TTGTTCGGCA AGAACACCAC CGCTGGTGTG CTGAACATCA CCACGCGCAA GCCCACCTTC
CACCGCGAAG GCAGCATCCA GCAGTCGTTC GGCGAAGACG GCTACCTGCA AACCCAGGGC
AGTTTCTCGG GGCCGATCAG CGAGACGCTG GCCGGGCGCA TCAGCGCCTA TCGCACCGAA
GACGATGGCT ATGTGAAGAA CATCCACAAC GGTGACGACC TCAACGGCGG CAAGCGCCAG
GGCTTTCGCA CCCAACTGCT GTTCAAGCCC AGCGACACCT TCAACCTGCG CTGGATAGGC
GAGTACAACG AAGAAGACTC CAACAACGGC ATCCTCAGCC TGTACAGCAC CGGGCCGACC
ATCAATGGCG TCAACCGCTA CGAAAGCCTG GCCGCCCAGG CGGGCGCGAC GCTGGTGTCG
GGCAAGGACC GCAAGGTCAA CTTCGACGCC GACCAGCAGG TGACGGTGTT CCAGGGCGGC
ACTTCGGTGG AGGCCAACTG GACCTTGCCC AACGACTTCA CCCTGACTTC GATCACCGCC
TACCGCTGGT GGGACTTCAC CCCGCGCAAC GACGACGGCC TGAACGTGCC GGTGTTCTAC
AGTGCCGGTG TATCGGTGCG TGACAAGCAG TACTCGCAGG AAATCCGCCT GGCATCGCCC
ACCGGTGGTG CATTCGACTA TGTGCTGGGT GCCTACTACT TCAAGCAGGA CCTGGACAAC
AAGTCCTTCA CCTATTACGG GCCGCAGGCG GATATCTGGA ACCTGACCCC GGCCGGTGCG
CTGAACAACG TCAACACAAT TGGTGATGGG CACATCGATA CCGACAGCTA CGCGCTGTTC
GCCCAGGGCA CCTGGCATGT CACCGATCGC CTGGACTTCA CCGCCGGTAT CCGCGGAACC
TACGAAGAAA AGAGCGCCTG GGTGACTCGC GATGCGCCCA GCGGCGGTGC CGCGGTAAAT
GGGGCCGCTG CCGCTGCGCG CCAGGCCCGG ATAGGTGCCT ATGATTCGGG CGACCTCAAC
CAATACAGCT TCAGCCCTTC CGGCCTGTTG GGCCTGAGCT ACCGCTTCAG CGAGCAACTG
CTGGGCTACG CCACCCTGAC TCACGGTGAG AAATCTGGCG GTGTAAACCT GACTGTAGGC
GCCGCGCCAC GGCTGGGCAC CGATTCGCTG CTGGTGGGCA CCGAGCGGGT CAACAACGCC
GAACTGGGCT TGAAAAGCAC CTTGTTCGAC GGCCGCCTGC AACTCAACAG CAATCTGTTC
TGGGCCGAAG TGCATGGTTA CCAGGCCAAC GTCTACGACC AGATCAACCG CGTGCAGTAC
CTGGCCAACG CTGGGCGCGT GCGCTCGCGC GGCCTGGAGT TCGAGGCCAC GGCGCTGCCG
ATTCGTGGCC TCACGGTCAA CTTCAACGGT TCGTGGAACG ACGTGCGCTA CACCGAGTAC
AAGGACGCCC CATGCCCGCC GGAGGTGAGC CTGGCCAATG CCACTGCCAC CTGCGATCTG
TCCGGCCACC AGGTGGTCGG CGCCTCCAAG TACATCGCCA ACCTCAACAC CCAATACAAG
TGGCAAGCCA CCGAGCATGT CGAGCCCTAC GTCACTGCCA GCTACGCCTT CCGCTCGAAG
GCCGTGGGCA CCATTGACGA TTCCGATTTC GGCCAGATCC CCAGCTACGC GCTGGTCAAC
CTTTCCGCCG GTGTGCGCCT GGACCAGGGC GACGGCGTGG TCGACCTGTC GCTGTGGGTG
AAAAACGCCG GCGACAAAAC CTACTTCACC AGCCTGTGGA ACTCCGCCAA CGGTGGTTAT
GCCGGCGTGC TCGGCACCCC ACGCACCTTC GGCGCAACCG CCCGTTACGA CTTCTGA
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| Protein sequence | MSGLSRWPAR ASRFTLQPLA AGVLLAASSG SFAEAPVSAT PAVEQEAKLG TVTVNARRRE
ETAQSVPTPI SVLDSETLET QRIYRVQDLQ QLVPSTNVAY VHARQSSISI RGLGNNPASD
GLEGSVGIYL DNVYLGRPGM AVFDLLDVEQ LEVLRGPQGT LFGKNTTAGV LNITTRKPTF
HREGSIQQSF GEDGYLQTQG SFSGPISETL AGRISAYRTE DDGYVKNIHN GDDLNGGKRQ
GFRTQLLFKP SDTFNLRWIG EYNEEDSNNG ILSLYSTGPT INGVNRYESL AAQAGATLVS
GKDRKVNFDA DQQVTVFQGG TSVEANWTLP NDFTLTSITA YRWWDFTPRN DDGLNVPVFY
SAGVSVRDKQ YSQEIRLASP TGGAFDYVLG AYYFKQDLDN KSFTYYGPQA DIWNLTPAGA
LNNVNTIGDG HIDTDSYALF AQGTWHVTDR LDFTAGIRGT YEEKSAWVTR DAPSGGAAVN
GAAAAARQAR IGAYDSGDLN QYSFSPSGLL GLSYRFSEQL LGYATLTHGE KSGGVNLTVG
AAPRLGTDSL LVGTERVNNA ELGLKSTLFD GRLQLNSNLF WAEVHGYQAN VYDQINRVQY
LANAGRVRSR GLEFEATALP IRGLTVNFNG SWNDVRYTEY KDAPCPPEVS LANATATCDL
SGHQVVGASK YIANLNTQYK WQATEHVEPY VTASYAFRSK AVGTIDDSDF GQIPSYALVN
LSAGVRLDQG DGVVDLSLWV KNAGDKTYFT SLWNSANGGY AGVLGTPRTF GATARYDF
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