Gene PputGB1_0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0205 
Symbol 
ID5867901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp241895 
End bp243838 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content65% 
IMG OID641545284 
Productcytochrome c class I 
Protein accessionYP_001666454 
Protein GI167031223 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0672] High-affinity Fe2+/Pb2+ permease 
TIGRFAM ID[TIGR00145] FTR1 family protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.844315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCTT TCGCATTCCC TTCGAGACTG GCCATGAATA CCCGTTCCCG TCTGCTCACC 
TGGCTGCCGG CTCTATTGCT CGGCCCGGTG CTGGCGCTGT GTAGCACCTT GGCGCTGGCC
GAGTCGCCCG CCGAGGCCGC AAAAGCCTTG CACCTGCTGG ACTACATTGG CGCCGATTAC
CCACCGACCG TTCAAGAAGG CAAGGTGATC GACGAGGGTG AATACCGTGA GCAACAGGAG
TTTGGCGCGG TATTGGGCGA CCTGGTCAAA GGCCTTCCCG CAAATGCCGA GCAAGCGGCA
CTGGAGCAGG GCGTCCAGGC ATTGCGCCAG GCCATCGATC AGCGCCAAGA GGGCACAGCG
GTCGCCAAGC AGGCCCGCCA GCTGGGCGCG CGCCTGGCTG TAGCCTACGA GGTCAGTCAG
GCCCCGGTGA TCACCCCGGA CCCCGCCCGT GGCGCGGCGC TGTATGCGCA AAACTGCGCC
ATCTGCCACG GTGACACGGG GGCTGGCGAC GGACCGGCTG GCGTGGGCCT GGAGCCTGCC
CCGGCCAACC TGCGTGATGC GGCACGCCTC GACCAGTTGA GCTTGTTCGA CCTGTACAAC
ACACTGGCCC TGGGCATCGA CGGTACCGAA ATGCCGTCCT TTGCCGACCA GTTGGACGAC
CGCCAGCGCT GGGATGTGGC CGCTTATATC GCCAGCTTCA CCGCCAAGCC AGAAGCTGGC
AAAGGTGACA AGACCTGGAA CATCGCCGAC CTGGCCCGCC AGACCCCGGC TGAGGTCGCT
GCCAATGAAG GCGCGGCGGT GCTGGAAGCA TTCCGCGCGC AGCGTGCCCA GCCGCCGCAG
GTCAAACGTG GCCCGGCGCA ACTGCTCGAA TACACCGCCA GCACGCTGGA CAAGAGCCTG
GCGGCCTACC GCGCAGGTGA CCATGACCAG GCCTATGACC TGTCGGTGGC GGCCTACCTG
GAAGGTTTCG AGTTGGTGGA AAGCTCACTG GACAATATCG ACACCCAGGC GCGCAAGGAC
ACCGAAAAAT CCCTCATGGC CTACCGCCAA TCGCTGCAGG ACGGGTTGCC CGTGGCTCAG
GCCGAGCAAC GGCTGGCCGA AGCCAAGCGC AAGCTGGACC AGGCCGCCAA GCTGTTGGGC
AGCGATGGCC TGAGCTGGTC GCTTAGCTAT ATCTCCGGTT TGCTGATCCT GTTGCGCGAA
GGGCTGGAAG CGATTCTGGT GCTGGCGGCG ATTCTGGCCT TCCTGCGTAA CACCGGGCAG
CAGTCGGCGG TACGCAGCGT CAACATAGGC TGGGGCCTGG CGCTGGTTGC CGGCTTCGCC
ACCTGGGCGC TGGCGGCCTA TGTGATCGAT GTGGGTGGGG CTCAGCGCGA GCTGCTGGAA
GGCTGCACGG CCTTGTTCGC TGCGGTGATG GTGTTGTGGC TAGGGGTATG GATGCACGAC
CGTCGACACG CCGCTGCCTG GCAGAACTAC ATCAAGAGCA GCCTGGTTAG CGGCGGCGGG
CGTTTCGGCT TCGCCCTGCT GGCGTTTTTC TCGGTGTACC GCGAACTGTT CGAAGTGATC
CTGTTCTACG AAACCCTGTG GTTGCAGGCA GGCCCTGCTG GGCATCAGGC TGTGCTGGCG
GGTGGCGCCA CGGCACTGGT GCTGTTGGTG GGCTTGGCTT GGGTGATTCT GCGTGGCTCT
GCGAAGCTGC CGCTTTCGCT GTTCTTCAGC ATCAACGCCG CGCTGCTGTG CGCGCTGTCG
GTGGTGTTCG CCGGGCATGG CGTGAAGGCG CTGCAAGAGG CCGGGGTGCT GGGCACACGA
CCGGTAGCGT TCTTCGAGTT CGACTGGTTG GGGATTCATG CCGACGCCTA CTCGTTGTCG
GCGCAGGCGG TGGCCTTGTT GGCCATCGTG TTCCTGTACG GGCGTTCGCG TCTGGCGGAA
AAGCGCAGGG CAACTGCAAA CTGA
 
Protein sequence
MFSFAFPSRL AMNTRSRLLT WLPALLLGPV LALCSTLALA ESPAEAAKAL HLLDYIGADY 
PPTVQEGKVI DEGEYREQQE FGAVLGDLVK GLPANAEQAA LEQGVQALRQ AIDQRQEGTA
VAKQARQLGA RLAVAYEVSQ APVITPDPAR GAALYAQNCA ICHGDTGAGD GPAGVGLEPA
PANLRDAARL DQLSLFDLYN TLALGIDGTE MPSFADQLDD RQRWDVAAYI ASFTAKPEAG
KGDKTWNIAD LARQTPAEVA ANEGAAVLEA FRAQRAQPPQ VKRGPAQLLE YTASTLDKSL
AAYRAGDHDQ AYDLSVAAYL EGFELVESSL DNIDTQARKD TEKSLMAYRQ SLQDGLPVAQ
AEQRLAEAKR KLDQAAKLLG SDGLSWSLSY ISGLLILLRE GLEAILVLAA ILAFLRNTGQ
QSAVRSVNIG WGLALVAGFA TWALAAYVID VGGAQRELLE GCTALFAAVM VLWLGVWMHD
RRHAAAWQNY IKSSLVSGGG RFGFALLAFF SVYRELFEVI LFYETLWLQA GPAGHQAVLA
GGATALVLLV GLAWVILRGS AKLPLSLFFS INAALLCALS VVFAGHGVKA LQEAGVLGTR
PVAFFEFDWL GIHADAYSLS AQAVALLAIV FLYGRSRLAE KRRATAN