Gene PputGB1_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0154 
Symbol 
ID5867842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp158467 
End bp159696 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content63% 
IMG OID641545227 
Productnucleoside recognition domain-containing protein 
Protein accessionYP_001666406 
Protein GI167031175 
COG category[R] General function prediction only
[S] Function unknown 
COG ID[COG0700] Uncharacterized membrane protein
[COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.72352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACG GCCTTTGGCT CGGCTTTTTC CTGGTGGCGG CGGTGTCCGC CCTGGCCCAA 
TGGCTGGTGG CCGGCAACGC GGGCATCTTC GCCGCAATGG TCGAAAGCAT CTTCGCCATG
GCCAAGCTGT CGGTGGAGGT GATGGTGCTG CTGTTCGGCA CGCTGACCCT GTGGCTGGGC
TTTCTCAAGA TCGCCGAAAA GGCCGGTATC GTCGAATGGC TGGCCAAGGT GCTGGGCCCG
CTGTTCGCCC GCCTGATGCC GGAAGTGCCG CCTGGTCACC CGGCCCTGGG CCTTATCACC
ATGAATTTTG CCGCCAACGG CCTGGGCCTG GACAACGCCG CGACGCCGAT TGGCCTGAAG
GCCATGCGCG CGCTGCAGGA GCTGAACCCC AGCAGCACCA CGGCGAGCAA CGCGCAAATC
CTGTTCCTGG TACTCAACGC CTCTTCGCTG ACGCTGCTGC CGGTCACCAT CTTCATGTAC
CGGGCCCAGC AGGGCGCGCC GGACCCAACC ATGGTGTTCC TGCCGATCCT GCTGGCGACC
AGCGTCTCGA CCTTGGTCGG CCTGCTGTCG GTGGCAGTGA TGCAGCGCTT GCGACTGTGG
GACCCGGTGG TGCTTGCCTA CTTCATCCCC GGCGCTTTGC TGCTGGGAGG TTTCATGGCG
TTCCTCGGCA CCCTGTCGGC CGCTGCACTG GCAAGCCTGT CGTCCATCTT GGGCAACCTC
ACGTTGTTTG GCGTGATCAT GCTGTTCCTG GTGATCGGTG CCTTGAAGCG GGTGAAGGTG
TATGAAGCCT TCGTCGAAGG TGCCAAGGAA GGTTTCGATG TGGCCAAGAA CCTGCTGCCC
TACCTGGTGG CGATGCTGGT GGCGGTGGGT GTGCTGCGCG CATCAGGTGC CTTGGAGCTG
GCCTTGGACG GCATTCGCCA TGCGGTGAAC TGGATGGGCC TGGACACACG CTTCGTCGAG
GGTTTGCCGA CGGCGCTGGT CAAGCCGTTT TCCGGTAGCG CAGCACGGGC CATGCTGATC
GAAACCATGC AGACCCAAGG CGTGGACAGT TTCCCGGCCT TGGTCGCGGC GACGATTCAA
GGCAGTACCG AAACCACCTT CTACGTACTG GCCGTGTACT TTGGCGCCGT CGGCATCCAA
CGTGTGCGCC ATGCAGTCGG TTGCGCACTG CTGGCCGAGT TGTCCGGGGT GATCGCGGCG
ATCTTCATCT GCTACTGGTT CTTCGCCTGA
 
Protein sequence
MLNGLWLGFF LVAAVSALAQ WLVAGNAGIF AAMVESIFAM AKLSVEVMVL LFGTLTLWLG 
FLKIAEKAGI VEWLAKVLGP LFARLMPEVP PGHPALGLIT MNFAANGLGL DNAATPIGLK
AMRALQELNP SSTTASNAQI LFLVLNASSL TLLPVTIFMY RAQQGAPDPT MVFLPILLAT
SVSTLVGLLS VAVMQRLRLW DPVVLAYFIP GALLLGGFMA FLGTLSAAAL ASLSSILGNL
TLFGVIMLFL VIGALKRVKV YEAFVEGAKE GFDVAKNLLP YLVAMLVAVG VLRASGALEL
ALDGIRHAVN WMGLDTRFVE GLPTALVKPF SGSAARAMLI ETMQTQGVDS FPALVAATIQ
GSTETTFYVL AVYFGAVGIQ RVRHAVGCAL LAELSGVIAA IFICYWFFA