Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0154 |
Symbol | |
ID | 5867842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 158467 |
End bp | 159696 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641545227 |
Product | nucleoside recognition domain-containing protein |
Protein accession | YP_001666406 |
Protein GI | 167031175 |
COG category | [R] General function prediction only [S] Function unknown |
COG ID | [COG0700] Uncharacterized membrane protein [COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.72352 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAACG GCCTTTGGCT CGGCTTTTTC CTGGTGGCGG CGGTGTCCGC CCTGGCCCAA TGGCTGGTGG CCGGCAACGC GGGCATCTTC GCCGCAATGG TCGAAAGCAT CTTCGCCATG GCCAAGCTGT CGGTGGAGGT GATGGTGCTG CTGTTCGGCA CGCTGACCCT GTGGCTGGGC TTTCTCAAGA TCGCCGAAAA GGCCGGTATC GTCGAATGGC TGGCCAAGGT GCTGGGCCCG CTGTTCGCCC GCCTGATGCC GGAAGTGCCG CCTGGTCACC CGGCCCTGGG CCTTATCACC ATGAATTTTG CCGCCAACGG CCTGGGCCTG GACAACGCCG CGACGCCGAT TGGCCTGAAG GCCATGCGCG CGCTGCAGGA GCTGAACCCC AGCAGCACCA CGGCGAGCAA CGCGCAAATC CTGTTCCTGG TACTCAACGC CTCTTCGCTG ACGCTGCTGC CGGTCACCAT CTTCATGTAC CGGGCCCAGC AGGGCGCGCC GGACCCAACC ATGGTGTTCC TGCCGATCCT GCTGGCGACC AGCGTCTCGA CCTTGGTCGG CCTGCTGTCG GTGGCAGTGA TGCAGCGCTT GCGACTGTGG GACCCGGTGG TGCTTGCCTA CTTCATCCCC GGCGCTTTGC TGCTGGGAGG TTTCATGGCG TTCCTCGGCA CCCTGTCGGC CGCTGCACTG GCAAGCCTGT CGTCCATCTT GGGCAACCTC ACGTTGTTTG GCGTGATCAT GCTGTTCCTG GTGATCGGTG CCTTGAAGCG GGTGAAGGTG TATGAAGCCT TCGTCGAAGG TGCCAAGGAA GGTTTCGATG TGGCCAAGAA CCTGCTGCCC TACCTGGTGG CGATGCTGGT GGCGGTGGGT GTGCTGCGCG CATCAGGTGC CTTGGAGCTG GCCTTGGACG GCATTCGCCA TGCGGTGAAC TGGATGGGCC TGGACACACG CTTCGTCGAG GGTTTGCCGA CGGCGCTGGT CAAGCCGTTT TCCGGTAGCG CAGCACGGGC CATGCTGATC GAAACCATGC AGACCCAAGG CGTGGACAGT TTCCCGGCCT TGGTCGCGGC GACGATTCAA GGCAGTACCG AAACCACCTT CTACGTACTG GCCGTGTACT TTGGCGCCGT CGGCATCCAA CGTGTGCGCC ATGCAGTCGG TTGCGCACTG CTGGCCGAGT TGTCCGGGGT GATCGCGGCG ATCTTCATCT GCTACTGGTT CTTCGCCTGA
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Protein sequence | MLNGLWLGFF LVAAVSALAQ WLVAGNAGIF AAMVESIFAM AKLSVEVMVL LFGTLTLWLG FLKIAEKAGI VEWLAKVLGP LFARLMPEVP PGHPALGLIT MNFAANGLGL DNAATPIGLK AMRALQELNP SSTTASNAQI LFLVLNASSL TLLPVTIFMY RAQQGAPDPT MVFLPILLAT SVSTLVGLLS VAVMQRLRLW DPVVLAYFIP GALLLGGFMA FLGTLSAAAL ASLSSILGNL TLFGVIMLFL VIGALKRVKV YEAFVEGAKE GFDVAKNLLP YLVAMLVAVG VLRASGALEL ALDGIRHAVN WMGLDTRFVE GLPTALVKPF SGSAARAMLI ETMQTQGVDS FPALVAATIQ GSTETTFYVL AVYFGAVGIQ RVRHAVGCAL LAELSGVIAA IFICYWFFA
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