| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0146 |
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| Symbol | |
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| ID | 5867834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 149339 |
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| End bp | 150937 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545219 |
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| Product | EAL domain-containing protein |
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| Protein accession | YP_001666398 |
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| Protein GI | 167031167 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.85827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.927101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCAC TCATCGCCTT GCTGCGCCAA ATTTTTTACC GCCCCTGGAT GCTGGCCACC
TTGGCAGCGT TGGCCAGCGC TGCGTTATTG CTCTCTGCCA GCATCGGCAT TGCCCTGCAA
CAAATGAAGC AAAGCGAAAG CGAACAGATG AACGCCCAGG GCGAGCGTTT TCTGGATCGC
CTCGAACAGG TGTTCGGCCA GTTGCGCGAA GGGGTCGACC TGCTGCAGGC CCAGCCATTG
CGCGGCTGCA GCCCGGCGAT GCTGGCAGCC TTGCAGCAGG TTGGCCTGAG CTCGCGGTTC
ATCTATGAAG CGGCCTATGT GGATGGCGAC GTTGCCTGCT CCAACCGCGG TGACGAGCGC
GCGTTCGTTC CCTTGCGAGC GCCGGATATC CAAGGCCCGA CGTACAGCTA CTGGCTTAAC
ACCACCACCG AGCCGAACGA GAACCTGGCA GCACTGATGC TGGGCCGTGG CAAGTTTCTG
GTTTCCACCT CGCGTGGTCA CTTGACCGAT GTAGTCGACC TGCCCCCAGG CGGCAGCCTG
GTGGTGGTGC TGGACAATGG CGCGCGGGCC ATCCCCGTGC TCGGCCCGCC ACAGGTATGG
CCACCACCCT CGGCCTGGTC AACCAGCCAC AAGTCGCTGC TGGAACTCAG TGATCGGCTG
ATCTACCGAA TGCCAACCAA GTCACCGGAT TACCAGCTTG TACTGATCGC GCCGCGGGCC
AGCCTGCCGC TGAGGATGAA CGGCATGCTC TGGTTGCTGT TCCCCGGTAG CGTGCTGGCG
GCCTGCTGCA TCGGTTGGCT GGTATTGCAG TTGATCCTGC AACGGCGGTC GATGAGTTCG
GAGTTGCAGA ATGCCTTGCG CCGTGGAGAG TTGCAGGTGC TGTACCAGCC AATCATCGAG
CTCGACAGCC GGCGTTGCGT TGGGGCCGAA GCCTTGGTGC GCTGGCGCCG TCCGGACGGC
ACGCTGACCA GCCCGGACCT ATTCATTCCG TTGGCGGAGA ATACCGGGCA GATTCGCCAG
ATCACAGACT TTGTCCTGCA ACGTGTACTT GAACAATTAG GGCAGTTGCT GCGCTCGCAC
CCCAAGCTGT ACATATCGGT AAACCTGGCG GCCTGCGATG TGATGGTGCC TCGTATCGGC
CGGGTGGCGG CGCGCTTGCT GGCGTTGCAT CGCGTGGCAC CCAGCCAGAT CGCCTTCGAG
GTAACCGAGC GCGGCCTGAT CGACGTGGTG GTGGCCCGCG ACAACCTGCA GGCGCTGCGC
GCCGTGGGGC ATCAAGTGCT GATCGACGAT TTTGGTACCG GCTATTGCAG CCTTGCCTAC
TTGCAGACCC TGCCAGTGGA CTGCCTGAAA ATCGACAAGG CGTTTATTGA TGCCCTGGGC
CATGATGCCG CCAGTAGCGG CGTGGCTCCG CATATCATCC GCATGGCCCA TGACCTGCAC
CTACGGGTGA TTGCCGAAGG TATCGAGTTC GAGGACCAGG CGGTGCTACT GAACAGTGAG
GGAGTCAATT ACGGCCAAGG CTGGCTGTTT GCCCGGCCAC TGAACGCCCG TCAATTTGCC
GAGCTGGTGA CCCGCGGGCA CCTGCCACGT CGGGTGTAG
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| Protein sequence | MSALIALLRQ IFYRPWMLAT LAALASAALL LSASIGIALQ QMKQSESEQM NAQGERFLDR
LEQVFGQLRE GVDLLQAQPL RGCSPAMLAA LQQVGLSSRF IYEAAYVDGD VACSNRGDER
AFVPLRAPDI QGPTYSYWLN TTTEPNENLA ALMLGRGKFL VSTSRGHLTD VVDLPPGGSL
VVVLDNGARA IPVLGPPQVW PPPSAWSTSH KSLLELSDRL IYRMPTKSPD YQLVLIAPRA
SLPLRMNGML WLLFPGSVLA ACCIGWLVLQ LILQRRSMSS ELQNALRRGE LQVLYQPIIE
LDSRRCVGAE ALVRWRRPDG TLTSPDLFIP LAENTGQIRQ ITDFVLQRVL EQLGQLLRSH
PKLYISVNLA ACDVMVPRIG RVAARLLALH RVAPSQIAFE VTERGLIDVV VARDNLQALR
AVGHQVLIDD FGTGYCSLAY LQTLPVDCLK IDKAFIDALG HDAASSGVAP HIIRMAHDLH
LRVIAEGIEF EDQAVLLNSE GVNYGQGWLF ARPLNARQFA ELVTRGHLPR RV
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