Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0133 |
Symbol | |
ID | 5867821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 136247 |
End bp | 137020 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641545206 |
Product | ABC transporter related |
Protein accession | YP_001666385 |
Protein GI | 167031154 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.875214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.6393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATG CCTTGATCCG CCTGGAACAG GTCGGCGTCA CTTTTGGCGG CGAGGCAGTA CTCGACAGCA TCGACCTGTC GGTCGCCCCC GGTCAGATCG TCACCCTGAT CGGCCCCAAC GGTGCCGGCA AGACCACCCT GGTGCGCGCC GTACTCGGTC TGCTCAAGCC ACACCGCGGC AAGGTATGGC GCAAGCCCAA GCTGCGCATT GGCTACATGC CACAAAAGAT CCAGGTCGAT GCCACGCTGC CGCTGTCGGT GCTGCGCTTC TTGCGCCTGG TGCCCGGCGT AGACCGCGCG GCAGCCTTGT CCGCGCTGCA GGAAGTGGGC GCCGAGCAGG TCATCGACAG CCCTATCCAG ACCATTTCCG GCGGCGAGAT GCAACGCGTA CTGCTGGCCC GCGCCCTGTT GCGCGAGCCC CAGTTGCTGG TGCTCGACGA ACCGGTACAA GGTGTGGACG TGGTCGGCCA GACCGAGCTG TACAACCTCA TCACCCGCCT GCGCGACCGC CACGGCTGCG GCGTGCTGAT GGTGTCCCAC GACCTGCACC TGGTGATGAG CGCCACCGAC CAGGTGGTGT GCCTGAACCG CCACGTATGC TGCTCGGGCC ACCCCGAGCA AGTCAGCGGC GACCCAGCGT TCGTCGAGCT GTTTGGCCAG ACCGCACCTA GCCTGGCCAT CTACCACCAC CATCACGACC ACAGCCACGA CCTGCACGGC TCGGTGGTCG CCCCTGGCAC CCATGTTCAC GGAGAGCACT GCAAGCATGG CTGA
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Protein sequence | MSDALIRLEQ VGVTFGGEAV LDSIDLSVAP GQIVTLIGPN GAGKTTLVRA VLGLLKPHRG KVWRKPKLRI GYMPQKIQVD ATLPLSVLRF LRLVPGVDRA AALSALQEVG AEQVIDSPIQ TISGGEMQRV LLARALLREP QLLVLDEPVQ GVDVVGQTEL YNLITRLRDR HGCGVLMVSH DLHLVMSATD QVVCLNRHVC CSGHPEQVSG DPAFVELFGQ TAPSLAIYHH HHDHSHDLHG SVVAPGTHVH GEHCKHG
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