| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0118 |
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| Symbol | |
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| ID | 5867806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 122270 |
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| End bp | 123859 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641545191 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001666370 |
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| Protein GI | 167031139 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0122351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAG TGATCGACGA CCACGCCCAC GGCCATGAGC ATGCACACGG CCCGGCCAAG
GGCCTGATGC GCTGGGTGCT GACCACCAAC CACAAGGACA TCGGCACCAT GTACCTGTGG
TTCGCCTTCA TGATGTTCCT GCTTGGTGGC TCGTTCGCCA TGGTGATCCG CGCCGAGCTG
TTCCAGCCGG GCTTGCAGAT CGTTGAGCCG GCGTTCTTCA ACCAGATGAC CACCATGCAT
GGCCTGATCA TGGTGTTCGG TGCAGTGATG CCGGCCTTCG TCGGGCTGGC CAACTGGATG
ATCCCATTGA TGATCGGCGC GCCAGACATG GCCTTGCCGC GGATGAACAA CTTCAGCTTC
TGGCTGCTGC CGGCGGCCTT CCTGCTGCTG GTCTCGACCC TGTTCAGCCC GGGTGGCGGG
CCTAACTTCG GCTGGACGTT CTACGCCCCG CTGTCTACCA CCTATGCGCC AGCCAGCGTC
ACCTTCTTCA TCTTCGCCAT CCACCTGATG GGTATCAGCT CGATCATGGG GGCGATCAAC
GTGATCGCCA CCATCCTCAA CCTGCGTGCC CCAGGCATGA CCCTGATGAA AATGCCGCTG
TTCGTCTGGA CGTGGCTGAT TACCGCGTTC CTGCTGATTG CAGTGATGCC GGTACTGGCC
GGCGTGGTGA CCATGATGCT GATGGACATC CACTTCGGCA CCAGCTTCTT CAGTGCCGCC
GGTGGCGGTG ACCCGGTGCT GTTCCAGCAT GTGTTCTGGT TCTTCGGCCA CCCTGAGGTG
TACATCATGA TCCTGCCGGC CTTCGGCGCG GTCAGCTCGA TCATCCCGGC GTTTTCGCGC
AAGCCGCTGT TCGGCTACAC CTCGATGGTA TATGCCACCG GCGCCATCGC CTTTCTGTCG
TTCATCGTTT GGGCCCACCA TATGTTCGTG GTCGGCATCC CGGTGGTCGG CGAGCTGTTC
TTCATGTACG CCACCATGCT GATTGCCGTG CCCACCGGGG TGAAGGTGTT CAACTGGGTC
AGCACCATGT GGGAAGGCTC GCTCACCTTC GAAACGCCAA TGCTGTTCGC CATTGCCTTC
GTCATCCTGT TCACCATCGG CGGTTTCTCC GGCCTGATGC TGGCGATTGC CCCGGCGGAC
TTCCAGTACC ACGACACCTA CTTCGTGGTG GCGCATTTCC ACTACGTGTT GGTGCCAGGG
GCAATTTTCG GCATCTTTGC ATCGGCCTAC TACTGGCTGC CGAAATGGAC CGGCCACATG
TACGACGAAA CCCTCGGCAA GCTGCACTTC TGGCTGTCGT TCATCGGCAT GAACATGGCC
TTCTTCCCCA TGCACTTCGT GGGGCTGGCC GGCATGCCGC GACGCATCCC GGACTACAAC
CTGCAGTTCG CCGACTTCAA CATGGTGTCG TCGATCGGCG CCTTCATGTT TGGCGCCACG
CAGATCTTCT TCCTGTTCAT TGTCATCAAG TGCATACGTG GGGGCGCGCC GGCGCCTGCC
AAGCCTTGGG ATGGCGCTGA GGGCCTGGAA TGGTCGATTC CTTCGCCTGC GCCCTACCAC
ACCTTCCAGA CACCCCCGGA AGTGAAATAG
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| Protein sequence | MSAVIDDHAH GHEHAHGPAK GLMRWVLTTN HKDIGTMYLW FAFMMFLLGG SFAMVIRAEL
FQPGLQIVEP AFFNQMTTMH GLIMVFGAVM PAFVGLANWM IPLMIGAPDM ALPRMNNFSF
WLLPAAFLLL VSTLFSPGGG PNFGWTFYAP LSTTYAPASV TFFIFAIHLM GISSIMGAIN
VIATILNLRA PGMTLMKMPL FVWTWLITAF LLIAVMPVLA GVVTMMLMDI HFGTSFFSAA
GGGDPVLFQH VFWFFGHPEV YIMILPAFGA VSSIIPAFSR KPLFGYTSMV YATGAIAFLS
FIVWAHHMFV VGIPVVGELF FMYATMLIAV PTGVKVFNWV STMWEGSLTF ETPMLFAIAF
VILFTIGGFS GLMLAIAPAD FQYHDTYFVV AHFHYVLVPG AIFGIFASAY YWLPKWTGHM
YDETLGKLHF WLSFIGMNMA FFPMHFVGLA GMPRRIPDYN LQFADFNMVS SIGAFMFGAT
QIFFLFIVIK CIRGGAPAPA KPWDGAEGLE WSIPSPAPYH TFQTPPEVK
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