Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0114 |
Symbol | |
ID | 5867802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 117511 |
End bp | 118230 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641545187 |
Product | carbonate dehydratase |
Protein accession | YP_001666366 |
Protein GI | 167031135 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0288] Carbonic anhydrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.900402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000744084 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCGTCA AGGACCCATC CAAGGTCGTA CCGCAGGTCC CCGCGGAAAG CGCCGATGCT GCCCTGAAGC ACATCGTCGA CGGCTTCCTG CGCTTTCACC ATGATGTCTT CCCTGATCAG CAAGAGCTGT TCAAGAAGCT TGCCACCGCG CAAACACCGC GCGCCATGTT CATTACCTGT GCAGACTCGC GCATTGTCCC CGAGCTGATC ACCCAGAGCT CGCCAGGCGA CCTGTTCGTG ACCCGTAACG TGGGCAACGT GGTACCGCCT TATGGCCAGA TGAATGGCGG TGTTTCCAGC GCGATCGAGT ACGCCGTACT TGCGCTGAAA GTGCACCACA TCATCATTTG CGGTCACTCC GACTGTGGCG CCATGCGTGC TGTACTCAAC CCGCACTCGC TGGACAAGAT GCCGACAGTC GGGGCCTGGT TGCGCCATGC CGAAGTGGCT CGCACCGTGG TCGAGAACAA CTGCTCGTGC GGCAGTGAAC ACGAAACGAT GCAGGTGCTG ACCAAGGAAA ACGTCATCGC CCAGCTGCAC CACCTGCGTA CCCACCCTTC GGTGGCCTCG CGTCTGGCCG CTGGCCAGCT GTACATTCAT GGCTGGGTCT ACGACATTGA GACCAGCAGG ATCGAAGCCT ATGACGCCGC CAGCGACAGC TTCCTGCCCC TGGCCGCCGG CGAGCCGGTC CCCTGCGCCA CTCCGAGAGG CCGCTACTAA
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Protein sequence | MPVKDPSKVV PQVPAESADA ALKHIVDGFL RFHHDVFPDQ QELFKKLATA QTPRAMFITC ADSRIVPELI TQSSPGDLFV TRNVGNVVPP YGQMNGGVSS AIEYAVLALK VHHIIICGHS DCGAMRAVLN PHSLDKMPTV GAWLRHAEVA RTVVENNCSC GSEHETMQVL TKENVIAQLH HLRTHPSVAS RLAAGQLYIH GWVYDIETSR IEAYDAASDS FLPLAAGEPV PCATPRGRY
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