Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0108 |
Symbol | |
ID | 5867796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 111321 |
End bp | 112394 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641545181 |
Product | hypothetical protein |
Protein accession | YP_001666360 |
Protein GI | 167031129 |
COG category | [R] General function prediction only |
COG ID | [COG4324] Predicted aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0000475774 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGCGCT CAGGCCCTGG GGCACTCGAC CGCGTTTTCA CCCGTTTGGT TCCGCTGCTG GCGGCGCTTC TGCTGAACGG TTGCACCAGC GCGGCCTACT ACGGGCAGTT GGCAGAGGGG CAGTGGCAAC TGCTGCGTGC GCGCCAGCCA GTGGAGCAGG TGGTGGCTGA CCCTGCTACC CCCGCGCCAT TGCGCGCGCA CTTGCAACAG GCCGAACGGG CGCGGGTGTT TGCCAGCCAG CAATTGAAAC TGCCGGATAA CCGCAGCTAT CGGGTTTACG CCGACCTTGG CCGCCCTTAC GTGGTGTGGA ATGTGTTCGC CACGCCCGAG TTGTCGTTGC AACCGGTGAC GCACTGTTTT CCGATTGCAG GGTGTGTGGC GTACCGCGGC TACTACCAGC AAGGCGCGGC GCGCGGCGCG GCGGCGCTGA TGCGCCAGGA CGGCCTGGAT GTGTACGTGG GGGGTGTGGA AGCTTATTCG ACCCTGGGCT GGTTCGATGA CCCGATCCTG TCCTCGATGG TGGGCTGGGG CGATGAGCGC TTGGCGACGT TGATTTTCCA TGAGCTGGCC CACCAGCGCT TTTATGTGCA GGACGACACC GAATTCAACG AGTCGTTTGC CTCGTTCGTC GAGCAGGAAG GCTCGCGGCA ATGGCGTGCG GCGCGTGGGT TGGCTGCCGG TGGCGAGGCG CAGGGGCAGC AGCGTGACCA GTTCATTCGG CTGGTGCTGG CCAGTCGTGA GCGGTTGCAG GCGATTTATG CCGGGCCTTT GGACGATGCG CACAAGCGGC TGGCCAAACG GGCGGAGTTC GATCGGCTGA GGCAGGAGTA TCGGCGGTTG CGAGATGGCC AATGGGGCGG GGACAAGCGC TATGACGTCT GGGTGTATGG GCCGATGAAC AATGCCAAGT TGTTACCGTT CGGGCTTTAT GACCAGTGGG TGCCGGCGTT TACGGCGGTG TTTCGTGAGG TTGGCGGAGA TTGGGCCAGG TTTTACCAGC GGGTCGAGCA ACTGGGGCGG TTGCCGATTG ATGAACGGAA GGCCGCATTG CAGGGGTTGA TGGTTAGCCA GTGA
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Protein sequence | MQRSGPGALD RVFTRLVPLL AALLLNGCTS AAYYGQLAEG QWQLLRARQP VEQVVADPAT PAPLRAHLQQ AERARVFASQ QLKLPDNRSY RVYADLGRPY VVWNVFATPE LSLQPVTHCF PIAGCVAYRG YYQQGAARGA AALMRQDGLD VYVGGVEAYS TLGWFDDPIL SSMVGWGDER LATLIFHELA HQRFYVQDDT EFNESFASFV EQEGSRQWRA ARGLAAGGEA QGQQRDQFIR LVLASRERLQ AIYAGPLDDA HKRLAKRAEF DRLRQEYRRL RDGQWGGDKR YDVWVYGPMN NAKLLPFGLY DQWVPAFTAV FREVGGDWAR FYQRVEQLGR LPIDERKAAL QGLMVSQ
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