Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0106 |
Symbol | |
ID | 5867794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 110353 |
End bp | 110766 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641545179 |
Product | lipoprotein |
Protein accession | YP_001666358 |
Protein GI | 167031127 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0000139404 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGCCAGC CCATGATGCT GATCGCCCTC AGTGCACTGG GGGCTTGCGC CAGCCCCTTG CCACCCGTCG ACCCCAAGCA GGCCTGGGTC GACCTCTACA CCATGACCCC CGGCCGAGTG ATCATGGCCG ACCGCCTCGA CGGCAAGCGC CTGGATGATG GCCGCTATTT CCAGGTAACG CCGGGCAAGC ACGAGTTGGT GGTGCGCTTC GATTATGAAA TCTACTCGGG CGGCATCATG TCCGAACCCA GGGACCGTAC CTGCTACCTG ACCGTGCGCT TTGATGACTT CAAGGCTGGC GAGCGCTATC GCCTGGAGGC GCGTGCGCCG GTGATGGAGC CGCAAGTGCT GCTGTATGAC GCCAGCCGCA AGGTGGTGGT GAACGAGCCT AGCAACGTGT TCTGCATTCC ATGA
|
Protein sequence | MRQPMMLIAL SALGACASPL PPVDPKQAWV DLYTMTPGRV IMADRLDGKR LDDGRYFQVT PGKHELVVRF DYEIYSGGIM SEPRDRTCYL TVRFDDFKAG ERYRLEARAP VMEPQVLLYD ASRKVVVNEP SNVFCIP
|
| |