Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0104 |
Symbol | |
ID | 5867792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 109584 |
End bp | 110009 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641545177 |
Product | OsmC family protein |
Protein accession | YP_001666356 |
Protein GI | 167031125 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1764] Predicted redox protein, regulator of disulfide bond formation |
TIGRFAM ID | [TIGR03562] peroxiredoxin, OsmC subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000000509604 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAGA CAGCATCGGC AATCTGGCAA GGTGGCCTGA AGGATGGCAA AGGCCTGCTT TCTACCGAAA GTGGCGCACT CAAGCAGAAC CCTTACGGCT TCAACACCCG TTTTGAAGGC ACGCCCGGGA CCAACCCGGA GGAGCTGATC GGGGCGGCGC ATGCCGGCTG TTTCTCGATG GCGCTGTCGA TGATGCTGGG TGAAGCGGGG CTGACCGCGG ACCGGATCGA CACTGCGGCC GAGGTGACGC TCGACAAGCA AGCGGATGGT TTTGCCATTA CGGCTGTGCA CCTGGTGCTC AGGGCCAAGG TGCCTGGGGC CAGCGAGGCG CAGTTCCTGG AGATCGCCAA CAAGGCCAAG GAAGGGTGCC CGGTGTCCAA GGTGTTGAAC GCCAAGATCA GCCTGGATGC AGCGTTGGTG GGCTGA
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Protein sequence | MKKTASAIWQ GGLKDGKGLL STESGALKQN PYGFNTRFEG TPGTNPEELI GAAHAGCFSM ALSMMLGEAG LTADRIDTAA EVTLDKQADG FAITAVHLVL RAKVPGASEA QFLEIANKAK EGCPVSKVLN AKISLDAALV G
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