| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0097 |
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| Symbol | trpA |
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| ID | 5867785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 104350 |
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| End bp | 105159 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641545170 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001666349 |
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| Protein GI | 167031118 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000224366 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCGTC TTGAACAACG CTTCGCCGAA CTGAAGGCCG AAGGCCGTTC GGCACTGGTC
ACCTTCGTCA CCGCAGGCGA CCCGGGCTAC GACGCCTCGC TGCAGATCCT CAAGGGGCTG
CCGGCCGCTG GCGCCGACGT GATCGAACTG GGCATGCCGT TCACCGACCC GATGGCCGAT
GGCGTGGCCA TCCAGCTGGC CACCCTGCGC GCCCTGGAAG CTGGCCAGAC CTTGGCCAAG
ACCCTGCAGA TGGTCCGCGA ATTCCGTGTG GATAACCAGA CCACGCCAAT CGTGCTGATG
GGCTACTACA ACCCGATCCA CCGCTTTGGC GTGGAACCGT TCGTGGCTGA AGCCAAAGCA
GCGGGCGTCG ATGGCCTGAT CATCGTCGAC CTGCCGCCAG AGCACGACGC CGAACTGGCC
ACCCCGGCCC AGGCCGCAGG CATCGACTTC ATCCGCCTGA CCACGCCGAC CACCGACGAT
GCGCGCCTGC CGCGGGTGCT GGAGCGCAGC TCCGGGTTTG TCTACTACGT GTCGGTGGCC
GGGGTGACCG GTGCCGGCTC GGCGACCACC GAGCACGTGA CCGAAGCCAT TGCCCGCCTG
CGCCGGCATA CCGACCTGCC GATCAGCGTT GGTTTCGGCA TCCGTACCCC GGAGCAGGCT
GCGAACATCG CCCGCCTGGC GGATGGTGTA GTGGTGGGCT CGGCGCTGGT CGACAAGATT
GCCCAGGCCA AGAGTGCCGA CCAGGCAGTG AATGATGTAC TCAGCCTGTG CTCGGCACTG
GCTGAAGGGG TGCGCGGCGC CCGTCGCTAA
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| Protein sequence | MSRLEQRFAE LKAEGRSALV TFVTAGDPGY DASLQILKGL PAAGADVIEL GMPFTDPMAD
GVAIQLATLR ALEAGQTLAK TLQMVREFRV DNQTTPIVLM GYYNPIHRFG VEPFVAEAKA
AGVDGLIIVD LPPEHDAELA TPAQAAGIDF IRLTTPTTDD ARLPRVLERS SGFVYYVSVA
GVTGAGSATT EHVTEAIARL RRHTDLPISV GFGIRTPEQA ANIARLADGV VVGSALVDKI
AQAKSADQAV NDVLSLCSAL AEGVRGARR
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