| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0093 |
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| Symbol | |
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| ID | 5867781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 100650 |
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| End bp | 102167 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641545166 |
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| Product | choline-sulfatase |
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| Protein accession | YP_001666345 |
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| Protein GI | 167031114 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3119] Arylsulfatase A and related enzymes |
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| TIGRFAM ID | [TIGR03417] choline-sulfatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000000000895462 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCGCC CGAATATCCT GTTCATCATG GCCGACCAGA TGGCCGCACC CTTGCTGCCG
ATCTACGCCC CTTCGCCCAT CCAGATGCCG CACCTGAGCC GCCTGGCCGA GCAGGCGGTG
GTGTTCGAGT CGGCCTACTG CAACAGCCCG CTGTGCGCAC CGTCCCGCTT TACCCTGGTC
AGCGGCCAAC TGCCTAGCCG CATCGGAGCC TACGACAATG CCGCCGATTT CCCTGCCGAT
GTGCCGACCT ATGCCCACTA CCTGCGCCGC CTGGGTTACC GCACCGCACT GTCAGGCAAG
ATGCACTTCT GCGGCCCGGA CCAACTGCAT GGCTACGAAG AGCGCCTGAC CAGCGATATT
TACCCAGCCG ACTATGGCTG GGCAGTGAAC TGGGATGAGC CGGATGTTCG CCCGAGCTGG
TACCACAACA TGTCCTCGGT GCTGCAGGCC GGTCCGTGCG TGCGCACCAA CCAGCTGGAT
TTCGACGAAG AAGTGGTGTT CAAGGCACGC CAGTACCTGT ACGACCACGT GCGTGATAAC
GATGGCCGAC CGTTCTGCCT GACCGTGTCC ATGACCCACC CGCACGACCC CTACACCATC
CCCAAGCGTT ACTGGGACCG CTACGAGGGT GTGGATATCC CCATGCCCCG TGCCGAGTTC
GGTCAGGCAG AACTCGACCC GCATTCGCAG CGCCTGCTGA AGGTCTATGA CCTGTGGAAC
AAGCCGCTGC CTATGGAAAA GATCCGCGAC GCCCGCCGCG CCTACTTCGG CGCTTGCAGC
TACATCGACG ACAACATCGG CCAGCTGCTG CAAACCCTGG AGGAGTGCAA CCTCGCCGAC
GACACCCTGA TCGTGTTCTC CGGCGACCAC GGCGACATGC TTGGCGAGCG AGGCCTCTGG
TACAAGATGC ACTGGTTCGA GATGTCGGCG CGGGTTCCGC TGCTTGTCCA TGCGCCCAAG
CGCTTTGCAG CAGGCCGGGT CAGCGCCTCG GTATCGACCT GCGACCTGCT GCCAACCCTG
GTCGAACTGG CCGGCGGGGC TGTGGATAAA AGCCTGCACC TGGACGGCCG CTCGCTTGTC
GGCCATCTGC AAGGGCAGGG CGGTCACGAT GAAGTGATCG GCGAATACAT GGCCGAAGGC
ACCGTCGGCC CGCTGATGAT GATCCGCCGC GGGCCGTACA AGTTCGTGTA CAGCGAGGAT
GACCCCAGCC TACTCTATGA CCTGAGCCGC GACCCGCACG AGCGGGAGAA CCTCACCGGC
AGCCCGGAGC ATCAGGCGCT GCTGCAGGCA TTTGTCGATG AAGCACAACA GCGCTGGGAT
ATCCCCAGCC TGCGCCAGCA GGTACTGGCC AGCCAGCGGC GCCGCCGCCT GGTGGCCGAG
GCGCTGGCCA TCGGCACGCT GAAAAGCTGG GACCATCAAC CGCTGGTGGA CGCCAGCCAA
CAGTACATGC GCAACCACAT CGATCTCGAC GACCTCGAGC GCAAGGCACG TTATCCACAG
CCCGCCCCCC TGGATTGA
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| Protein sequence | MTRPNILFIM ADQMAAPLLP IYAPSPIQMP HLSRLAEQAV VFESAYCNSP LCAPSRFTLV
SGQLPSRIGA YDNAADFPAD VPTYAHYLRR LGYRTALSGK MHFCGPDQLH GYEERLTSDI
YPADYGWAVN WDEPDVRPSW YHNMSSVLQA GPCVRTNQLD FDEEVVFKAR QYLYDHVRDN
DGRPFCLTVS MTHPHDPYTI PKRYWDRYEG VDIPMPRAEF GQAELDPHSQ RLLKVYDLWN
KPLPMEKIRD ARRAYFGACS YIDDNIGQLL QTLEECNLAD DTLIVFSGDH GDMLGERGLW
YKMHWFEMSA RVPLLVHAPK RFAAGRVSAS VSTCDLLPTL VELAGGAVDK SLHLDGRSLV
GHLQGQGGHD EVIGEYMAEG TVGPLMMIRR GPYKFVYSED DPSLLYDLSR DPHERENLTG
SPEHQALLQA FVDEAQQRWD IPSLRQQVLA SQRRRRLVAE ALAIGTLKSW DHQPLVDASQ
QYMRNHIDLD DLERKARYPQ PAPLD
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