| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0090 |
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| Symbol | aroE |
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| ID | 5867778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 97051 |
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| End bp | 97875 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641545163 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001666342 |
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| Protein GI | 167031111 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000000000484063 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACCAGT ACGTCGTTTT TGGTAACCCC ATCGGCCACA GCAAGTCGCC GCTGATCCAC
CGCCTGTTTG CCGAGCAGAC CGGCCAGGAC ATGGAATACG CCACCCTGCT GGCGCCGCTG
GACGAGTTCA GTGATTGCGC GCGCGGCTTC TTCAAGCAAG GCAGCGGCGG TAACGTCACC
GTGCCGTTCA AGGAAGAAGC CTACCGCTTG TGCGACAGCC TGACCCCGCG TGCCCAGCGC
GCTGGCGCAG TGAACACGCT GAGCAAGCTG GCTGATGGCA CCCTGCAGGG CGACAACACC
GATGGCGCTG GCCTGGTGCG CGACTTGACG GTGAATGCCG GGGTCGTGCT TGCCGGTAAG
CGCATTCTCA TCCTGGGGGC CGGTGGCGCC GTGCGTGGCG TGCTGGAGCC CATATTGGCG
CACAAGCCGC AATCGTTGGT AATTGCAAAC CGGACGGTGG AAAAGGCCGA GCAGCTGGCG
CGTGAGTTCG ATGAGCTGGG CCCGGTGGTG GCGAGCGGGT TCGCCTGGTT GCAGGAGCCG
GTGGATGTGA TCATCAACGC CACCTCGGCG AGCCTGGCCG GGGAAATGCC GCCGATTGCC
GACAGCCTGG TCGAGGCGGG GCGTACGGTT TGCTACGACA TGATGTATGG CAAGGAGCCT
ACGCCGTTTT GCCAATGGGC CGCTGACTTG GGCGCTGCAA AGGTGCTGGA TGGGTTAGGG
ATGCTGGCTG AGCAGGCGGC TGAAGCCTTC TTTATCTGGC GTGGGGTTCG GCCTGATACC
GCGCCGGTGT TGGCGGAGCT GCGACGGCAG CTCGCTCGGG GCTGA
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| Protein sequence | MDQYVVFGNP IGHSKSPLIH RLFAEQTGQD MEYATLLAPL DEFSDCARGF FKQGSGGNVT
VPFKEEAYRL CDSLTPRAQR AGAVNTLSKL ADGTLQGDNT DGAGLVRDLT VNAGVVLAGK
RILILGAGGA VRGVLEPILA HKPQSLVIAN RTVEKAEQLA REFDELGPVV ASGFAWLQEP
VDVIINATSA SLAGEMPPIA DSLVEAGRTV CYDMMYGKEP TPFCQWAADL GAAKVLDGLG
MLAEQAAEAF FIWRGVRPDT APVLAELRRQ LARG
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