| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0080 |
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| Symbol | |
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| ID | 5867768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 87233 |
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| End bp | 87541 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641545153 |
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| Product | tetratricopeptide domain-containing protein |
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| Protein accession | YP_001666332 |
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| Protein GI | 167031101 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.163561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000000000757426 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCGAAT CGCTGGAGAA GATGCTGGCC AAGGGTGTGG ATAACCCGCT GCTCAGGTTT
GGGCTGGGCA AGGCTTGGCT GGATGAAGGC AACGGCGTTG AAGCGGCGGT GCACCTGGCG
CGCTGTGTTG AGCAGGACCC GAAATATTCC GCAGCGTGGA AGCTGCTGGG CAAGGCGTAT
CAGTTGCAGG GTGACCTGAC GGCAGCACGC AAGGCTTGGG AAGACGGAAT CGTGGCGGCG
CAGGCCCATG GGGACAAGCA GGCCGAGAAA GAGATGACCG TGTTCCTCAA GAAGCTCAAC
AAGGTCTGA
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| Protein sequence | MRESLEKMLA KGVDNPLLRF GLGKAWLDEG NGVEAAVHLA RCVEQDPKYS AAWKLLGKAY
QLQGDLTAAR KAWEDGIVAA QAHGDKQAEK EMTVFLKKLN KV
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