| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0077 |
|---|
| Symbol | glyQ |
|---|
| ID | 5867765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 84604 |
|---|
| End bp | 85551 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641545150 |
|---|
| Product | glycyl-tRNA synthetase subunit alpha |
|---|
| Protein accession | YP_001666329 |
|---|
| Protein GI | 167031098 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.189656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000000000112208 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCAGC CTACGCCAGC CGTGCGTACC TTCCAAGACC TGATCCTCGC CCTGCAGAAC
TACTGGGCAG CTCAAGGTTG TGTGGTGCTT CAGCCCTACG ATATGGAAGT AGGCGCCGGC
ACTTTCCATA CCGCCACGTT CCTGCGCGCC GTCGGCCCAG AGACCTGGAA CGCCGCCTAC
GTGCAGCCTA GCCGTCGCCC TGCCGACGGG CGGTATGGCG AAAACCCAAA CCGCCTGCAG
CACTACTATC AGTTCCAGGT AGTGCTCAAG CCCAACCCGG CCAACTTCCA GGAGCTGTAC
CTCGGCTCGC TGAAAGCCAT CGGCCTGGAC CCGCTGGTGC ACGACATCCG CTTCGTCGAA
GACAACTGGG AATCGCCGAC CCTCGGCGCC TGGGGTCTGG GCTGGGAAAT CTGGCTGAAC
GGCATGGAAG TCACCCAGTT CACCTACTTC CAGCAGGTAG GCGGCATCGA GTGCTACCCG
GTTACCGGTG AAATCACCTA CGGCCTGGAG CGCCTGGCCA TGTACATTCA GGGCGTGGAC
TCGGTGTACG ACCTGGTGTG GGCCGACGGC CCGTTCGGCA AAGTCACCTA TGGCGATGTG
TTCCACCAGA ACGAAGTGGA GCAGTCGACC TACAACTTCG AACACGCCAA CGTCGACAAG
CTGTTCGAAC TGTTCGACTT CTACGAAAGC GAAGCCAACC GCCTGATCAA GCTGGACCTG
CCGTTGCCGA CCTACGAAAT GGTCCTGAAG GCCTCGCACA CCTTCAACCT GCTGGACGCC
CGCCGCGCCA TCTCGGTAAC CGAGCGCCAG CGTTACATCC TGCGTGTACG TACCCTGGCC
CGGGACGTGG CGCAAAGCTA TCTGCAAGCC CGCGCACGCC TGGGCTTCCC GATGGCCACC
CCTGAACTGC GTGACGAAGT GTTGGCTAAG CTGGAGGCTG CACAATGA
|
|---|
| Protein sequence | MSQPTPAVRT FQDLILALQN YWAAQGCVVL QPYDMEVGAG TFHTATFLRA VGPETWNAAY
VQPSRRPADG RYGENPNRLQ HYYQFQVVLK PNPANFQELY LGSLKAIGLD PLVHDIRFVE
DNWESPTLGA WGLGWEIWLN GMEVTQFTYF QQVGGIECYP VTGEITYGLE RLAMYIQGVD
SVYDLVWADG PFGKVTYGDV FHQNEVEQST YNFEHANVDK LFELFDFYES EANRLIKLDL
PLPTYEMVLK ASHTFNLLDA RRAISVTERQ RYILRVRTLA RDVAQSYLQA RARLGFPMAT
PELRDEVLAK LEAAQ
|
|---|
| |