| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0076 |
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| Symbol | glyS |
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| ID | 5867764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 82556 |
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| End bp | 84607 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641545149 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001666328 |
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| Protein GI | 167031097 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.589695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000000000290731 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGCTC AAGATTTCCT GGTAGAACTG GGCACCGAAG AGCTGCCACC CAAGGCCCTC
GCCAGCCTCG GCGACGCCTT CCTGGCCGGC ATCGAGAAAG GCCTGCAGGC CGCTGGCCTG
AACTACACCG GCAAGCAGGT GTACGCCGCG CCACGTCGCC TGGCCGTGCT GATCCGCCAG
CTGGACGTGC AGCAGCCTGA CCGCAGCATC AACATCGACG GCCCGCCCAT GCAGGCTGCT
TTCAAAGACG GCGAGCCGAC CCAGGCAGCC TTGGGCTTTG CCAAGAAGTG CGGCGTAGAG
CTGGCCGAAA TCGACCAGAG CGGCGCCAAG CTACGCTTCT CCCAGCACAT TCCGGGCAAG
GCCACCGCCA GCCTGCTGCC GACCATCATC GAGGATTCGC TCAACGACCT GCCGATCCCC
AAGCGCATGC GCTGGGCGGC CAGCCGTGAA GAGTTCGTGC GCCCAACCCA ATGGTTGGTG
ATGCTGCTGG GCGACCAGGT GGTCGACTGC ACTATCCTGT CGCAGAAGGC CGGCCGTGAA
TCCCGTGGTC ACCGCTTCCA CCACCCGGAA AACGTGGTGA TCACCACCCC GGCCAACTAC
GTCGAAGACC TGCGCAAAGC CTACGTGCTG GCGGACTTCG CCGAGCGCCG CGAGCTGATC
AGCAAGCGTA CCGCCGAGCT TGCCATGCAG CAGGAAGGCA CGGCCATCGT GCCGCCGGCG
CTGCTGGACG AAGTGACCGC CCTGGTCGAG TGGCCAGTGC CGCTGGTGTG CTCGTTCGAG
GAGCGTTTCC TCGAGGTGCC GCAGGAAGCC CTGATTACCA CCATGCAGGA CAACCAGAAG
TACTTCTGTC TGCTGGACAG CGAAGGCAAG CTGCTGCCGC GCTTCATCAC CGTGGCCAAC
GTCGAAAGCC GCGACCCGAA GCAGATCGTG CAAGGCAACG AGAAGGTCGT GCGCCCACGC
CTGACCGACG CCGAGTTCTT CTTCAAGCAA GACAAGAAGC AGCCGCTGGA AACCTTCAAC
GAGCGCCTGA AAAACGTGGT GTTCCAGGCT CAACTGGGCA CCGTGTACGA CAAGGCCGAG
CGTGTTTCCA AGCTGGCTGC CTTCATCGCC CCGCTGATCG GTGGCGACGC CCAGCGTGCC
GGCCGTGCGG GCCTGCTGTC CAAGTGCGAC CTGGCCACCG AAATGGTCGG CGAATTCCCT
GAAATGCAGG GTGTTGCCGG TTACTACTAC GCGCTCAACG ACGGTGAGCC GCAAGACGTT
GCCCTGGCCC TGAACGAGCA GTACATGCCG CGCGGTGCTG GCGCCGAGCT GCCGCAGACC
CTCACCGGTG CTGCCGTGGC CATCGCCGAC AAGCTCGACA CCCTGGTCGG CATCTTCGGC
ATCGGTATGC TGCCTACCGG CAGCAAGGAC CCGTATGCCC TGCGCCGTGC CGCGCTGGGC
GTGCTGCGTA TCCTGATCGA GAAGCAGCTG GACCTGAACC TGACCGGTGC GGTCGAGTTC
GCGGTCAAGC AATTCGGTGC CAAGGTCAAG GCCGCGGGCC TGGCGGAGCA GGTACTGGAG
TTCATCTTCG ACCGCCTGCG TGCGCGTTAC GAAGACGAAG GCATCGACGT CGCCACTTAC
CTGTCGGTAC GTGCCCTGCA GCCAGGCTCG GCCCTGGACT TCGACCAGCG CGTGCAGGCC
GTGCAGGCCT TCCGCAAGCT GCCGGAAGCC GAAGCCCTGG CCGCGGTGAA CAAGCGTGTA
TCGAACCTGC TGAGCAAGGC TGAAGGCGCC ATCGCCGAAC AGGTCGAGCC GAAGTACTTC
GACAACGCCA ACGAGTTCTC CCTGTACTCG GCCATCCAGC AGGCCGACCA GGCCGTGCAA
CCGATGGCTG CTGCACGCCA GTACAGCGAA TCGCTGGCCC GCCTGGCCGC CCTGCGTGAC
CCGGTCGATG CCTTCTTCGA GGCGGTGATG GTGAACGCCG AAGACGCCAA GGTACGTGCC
AACCGTTATG CCCTGCTCAG CCGCCTGCGC GGCCTGTTCC TGGGCGTGGC CGACATTTCG
CTGCTGGGGT AA
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| Protein sequence | MSAQDFLVEL GTEELPPKAL ASLGDAFLAG IEKGLQAAGL NYTGKQVYAA PRRLAVLIRQ
LDVQQPDRSI NIDGPPMQAA FKDGEPTQAA LGFAKKCGVE LAEIDQSGAK LRFSQHIPGK
ATASLLPTII EDSLNDLPIP KRMRWAASRE EFVRPTQWLV MLLGDQVVDC TILSQKAGRE
SRGHRFHHPE NVVITTPANY VEDLRKAYVL ADFAERRELI SKRTAELAMQ QEGTAIVPPA
LLDEVTALVE WPVPLVCSFE ERFLEVPQEA LITTMQDNQK YFCLLDSEGK LLPRFITVAN
VESRDPKQIV QGNEKVVRPR LTDAEFFFKQ DKKQPLETFN ERLKNVVFQA QLGTVYDKAE
RVSKLAAFIA PLIGGDAQRA GRAGLLSKCD LATEMVGEFP EMQGVAGYYY ALNDGEPQDV
ALALNEQYMP RGAGAELPQT LTGAAVAIAD KLDTLVGIFG IGMLPTGSKD PYALRRAALG
VLRILIEKQL DLNLTGAVEF AVKQFGAKVK AAGLAEQVLE FIFDRLRARY EDEGIDVATY
LSVRALQPGS ALDFDQRVQA VQAFRKLPEA EALAAVNKRV SNLLSKAEGA IAEQVEPKYF
DNANEFSLYS AIQQADQAVQ PMAAARQYSE SLARLAALRD PVDAFFEAVM VNAEDAKVRA
NRYALLSRLR GLFLGVADIS LLG
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