| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0072 |
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| Symbol | |
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| ID | 5867760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 77652 |
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| End bp | 79298 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641545145 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001666324 |
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| Protein GI | 167031093 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000000289824 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCATCAG CCGATTCTGT CTTCGACTAC GTGGTCGTTG GTGCCGGTCC TGCCGGTTGC
CTGCTGGCCA ATCGTTTGTC CGCCGATCCT TCCTGCCGCG TGCTGCTGCT GGAGGCAGGT
GGTCGCGACA ACTATCCCTG GATCCACATT CCCGTCGGTT ACCTCTACTG CATCGGCAAC
CCACGCACCG ACTGGTGCTT CAGGACCGAG GCACAGCCTG GCCTGGGCGG TCGCGCACTG
GGTTACCCAC GGGGCAAGGT GCTAGGTGGT TGTTCTTCGA TCAACGGCAT GATCTACATG
CGTGGCCAGG CCGCCGACTA TGACCAGTGG GCTGAGCAAG GCAACGGTGG CTGGGCCTGG
AAAGACGTGC TGCCGCTGTT CAAGGCCAGC GAGAACCACT TTGCCGGCGC CAGCGAGCAC
CATGGCGCTG ACGGCGAATG GCGAGTCGAG CGCCAGCGCT ACAGCTGGCC AATTCTCGAT
GCTTTCCGCG ATGCCGCCGA GCAAAGCGGT ATCGGCAAGG TCGATGACTT CAACACCGGC
GACAACGAGG GCTGTGGATA CTTTCAGGTC AACCAGCGTA GCGGCGTGCG CTGGAATGCC
TCCAAAGCTT TCCTGCGGCC TATCAAGGGC CGCGCCAACC TCACGGTGCT GACCGGCGTT
CAGGTTGAAC AGGTACTGCT CAACAACACC CGCGCGCGGG CCGTGAAAGC GTTTTGGCAA
GGCGCCTGGC ATGAGTTTGC GGCGCGCCGT GAAATCATCC TCTGTGCGGG TGCGGTCGGC
TCGCCCGGAA TCTTGCAGCG CTCCGGCATT GGCCCGCGTC AGTTGCTGGA AACCTTGGGG
ATTGGCGTTC GGCACGACAT GCCTGGCGTT GGTGGCAACC TGCAGGACCA CCTGCAACTT
CGGCTGATCT ACCAGATCCG CAATACCCGC ACCTTGAACC AGATGGCCAA CAGCCTTTGG
GGCAAGATGG GCATGGGCCT GCGCTACCTC TACGACCGCA GCGGTCCACT GGCCATGGCG
CCAAGCCAGC TGGGCGCCTT CGTGCGTTCC AGCACCGACC AGGCCACCGC CAACCTGCAG
TACCACGTGC AGCCGCTATC ACTGGAGCGT TTCGGCGAAC CGTTGCATCA GTTCCCGGCC
TTTACTGCTT CGGTATGCAA CCTGCACCCG GCCAGCCGTG GGCGTATCGA TATCTGCAGC
ACTGACATGA ACAGTACGCC GCTGATCAAC CCCAACTACC TCAGCGACCC GCAAGACCTG
CGTGTCGCTG CCGATGCCAT CCGCCTCACC CGGCGCATCG TCCAGGCCCC TGCCCTGGCG
GCGTTCGAGC CTAAGGAATA CCTGCCGGGC CCGGCCCTGC AATCCGAGGA GGAGCTGTTC
GACGCTGCTG GCAAGATCGG CACCACCATC TTCCACCCGG TCGGTACCTG CCGCATGGGC
AATGGTGCCA TGGATGTTGT GGATAACCAG CTGCGCGTAC ACGGCATCCC CGGCCTGCGC
GTGGCAGATG CCTCGATCAT GCCGCAGATC ACCTCCGGCA ATACCTGTTC CCCCACCCTG
ATGATCGCCG AGAAGGCGGC GCAACTGATC CTCAAAGGAG CTGCTACCCA GACCTACTTG
AACGAAGACG CGTTACCGAC GCCCTGA
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| Protein sequence | MPSADSVFDY VVVGAGPAGC LLANRLSADP SCRVLLLEAG GRDNYPWIHI PVGYLYCIGN
PRTDWCFRTE AQPGLGGRAL GYPRGKVLGG CSSINGMIYM RGQAADYDQW AEQGNGGWAW
KDVLPLFKAS ENHFAGASEH HGADGEWRVE RQRYSWPILD AFRDAAEQSG IGKVDDFNTG
DNEGCGYFQV NQRSGVRWNA SKAFLRPIKG RANLTVLTGV QVEQVLLNNT RARAVKAFWQ
GAWHEFAARR EIILCAGAVG SPGILQRSGI GPRQLLETLG IGVRHDMPGV GGNLQDHLQL
RLIYQIRNTR TLNQMANSLW GKMGMGLRYL YDRSGPLAMA PSQLGAFVRS STDQATANLQ
YHVQPLSLER FGEPLHQFPA FTASVCNLHP ASRGRIDICS TDMNSTPLIN PNYLSDPQDL
RVAADAIRLT RRIVQAPALA AFEPKEYLPG PALQSEEELF DAAGKIGTTI FHPVGTCRMG
NGAMDVVDNQ LRVHGIPGLR VADASIMPQI TSGNTCSPTL MIAEKAAQLI LKGAATQTYL
NEDALPTP
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