| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0071 |
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| Symbol | |
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| ID | 5867759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 76586 |
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| End bp | 77473 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641545144 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001666323 |
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| Protein GI | 167031092 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000000017949 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCGACT GGAACGATCT GCGGTTTTTC CTCGAGTTAC AGCGCAGCGG CCGCCTGCTT
ACCGCCGCCA AGCGCCTGAA CACCACCCAC AGCACCGTGG CCCGGCACAT CGAGAGCATC
GAGCAGAGCC TGGGCACCGC GCTGTTCGTG CAGCATGCCC AGGGTTACGA GTTAACCCCC
TCGGGCCAAG CCTTGCTCAA GCATGCCGAA GCCATGGAGA ACGTCGCCCT GCTGGCGCAG
GAAGAAATCA CTCAGGCCAT CACGCCGCTG GGCAAGATTC GCCTGGGGGT GACCGAAGGC
ATCGGCATCA TGTTCTTCAC CCCACGCATG AACGCGTTGT TCGAGCGTTA CCCTGGCCTT
GAAGTGGAAC TGGTGGCCGT ACCGCGTTTC GTCAGCATCC TCAACCGCGA GGCGGAAATC
AGCATCCACC TGGAGCGGCC CAACGCCGAT CTGCTGATCA CTCGCAAACT CACCGATTAT
CGCCTGGCGC TGTACGCCAG CCAGGACTAT TTGCACCGCG CGCCACCACT GCGCAACCGC
GAAGACCTGG CCCGGCACAG CTGGATCGGC TACGTCGACG ACTTGCTGTT CAGCCAGGAG
TTGCTGTTTC TCAACAGCTT CTGCCGGGCA CCCAACGTGG TGTTTCGCAG CACCAGCGTG
ATCGCCCAGC AAGCCGCCGC CCGCGCCGGG CTGGGCATCG CCGTGCTGCC CAACTACATG
GCTCGCCACG ACCCGACACT GGTACGCGTG CTGCCTGGCG AAACCATCCA GCGCAGTTAC
TGGATCTGCA CCCGTCGCGA GCTGCATAAA TCGGTGCGCC TGCGGGTGGT GTGGGACTAT
TTGCTGGCGC TGTGCGCGGC GCAGCAGGAT GAGCTGCTAG CCCAATAG
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| Protein sequence | MFDWNDLRFF LELQRSGRLL TAAKRLNTTH STVARHIESI EQSLGTALFV QHAQGYELTP
SGQALLKHAE AMENVALLAQ EEITQAITPL GKIRLGVTEG IGIMFFTPRM NALFERYPGL
EVELVAVPRF VSILNREAEI SIHLERPNAD LLITRKLTDY RLALYASQDY LHRAPPLRNR
EDLARHSWIG YVDDLLFSQE LLFLNSFCRA PNVVFRSTSV IAQQAAARAG LGIAVLPNYM
ARHDPTLVRV LPGETIQRSY WICTRRELHK SVRLRVVWDY LLALCAAQQD ELLAQ
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