| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0068 |
|---|
| Symbol | |
|---|
| ID | 5867756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 73589 |
|---|
| End bp | 74473 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641545141 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001666320 |
|---|
| Protein GI | 167031089 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.415147 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0000286033 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCATCG GTAACAACCT TCACGTGGAC GCCTTTTTCG ACGAGGCGAC CTCGACCATC
AGCTACTTGG TCATGGACCG TGAAACCCGG CAATGCGCCT TGATCGACAG CGTGCTGGAT
TATGACCCCA AGTCCGGGCG CACCTGCAGC GCATCGGCGG ATCGCCTGAT CGAGCGCGTG
AGCGAGCTGA ACGCCAGCGT GCGTTGGGTG CTGGAAACCC ATGTACACGC CGATCATCTT
TCAGCGGCTG CCTACCTCAA GGAAAAGCTC GGCGGCCATA CCGCTATCGG CGCGCACATC
ACCCAAGTGC AGAAGGTGTT CGGTGCCTTG TTCAATGCCG AGCCTGGCTT CGCCCGTGAC
GGCAGCCAGT TCGATGTGCT GCTTGAAGAC GAGGAAGGTT TCCGCATTGG CAACCTGCAT
GCCCGTGCGC TGCATACGCC GGGGCATACG CCTGCATGCA TGAGCTTCAT GATCGAGGAC
GCCGGCGAGA TCGCAGTGTT CGTCGGCGAC ACCTTGTTCA TGCCCGACTA CGGCACAGCC
CGTTGTGATT TCCCAGGCGC CGACGCCCGT ACTTTGTACC GCTCGATTCG TCGCCTGCTG
GCGTTCCCCG ACCAGACCCG GCTGTTCATG TGCCACGACT ACCTGCCAGG TGGCCGCGAC
ATGCAGTACG TCACCACCGT GGCAGAGCAG CGCGCCCACA ACATCCACAT CCACCAGGGT
ATCGATGAGG ACAGCTTCGT TGCCATGCGC GAAGCCCGCG ACAAGACCCT CGACATGCCG
GTGCTTATCC TGCCCTCGGT GCAGGTGAAC ATGCGCAGCG GCCAGCTCCC CGCGCCGGAA
GCAAACGGCG TGAGCTATTT GAAGATCCCG CTGAACAAGC TGTAA
|
|---|
| Protein sequence | MIIGNNLHVD AFFDEATSTI SYLVMDRETR QCALIDSVLD YDPKSGRTCS ASADRLIERV
SELNASVRWV LETHVHADHL SAAAYLKEKL GGHTAIGAHI TQVQKVFGAL FNAEPGFARD
GSQFDVLLED EEGFRIGNLH ARALHTPGHT PACMSFMIED AGEIAVFVGD TLFMPDYGTA
RCDFPGADAR TLYRSIRRLL AFPDQTRLFM CHDYLPGGRD MQYVTTVAEQ RAHNIHIHQG
IDEDSFVAMR EARDKTLDMP VLILPSVQVN MRSGQLPAPE ANGVSYLKIP LNKL
|
|---|
| |