| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0060 |
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| Symbol | |
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| ID | 5867748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 65151 |
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| End bp | 66494 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641545133 |
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| Product | outer membrane porin |
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| Protein accession | YP_001666312 |
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| Protein GI | 167031081 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.203485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA AAGTACCACT GTATTTGGCG GCAGTTTCTG CGCTGTCTGG AAGCTATGCT
ATTTCGGCAC AAGCTGAAGA CAAGCCAGAA GGCTTCATTG AAGGCAGCAG CCTTACAGTG
TTGAACCGTA ACTTCTACTT CAACCGTGAT AACCGCGACA GCACCGCCCC CACTTACAAC
AGTGGCAAGG GCAATACGAA CGGCTACTCC GAAGCCTGGG CGCACGCGAT CATCAGCAAA
TTCAACTCCG GGTTTACCCA AGGTACCGTT GGCTTTGGCG TTGATGCCTT TGCCATGATC
GGCCTCAAGC TCGACACCGG TGATGGGCGC AACGGCGGCC GTAGCTCCTT CGACGTGCTG
CCCGTTGATA ACAAGGGTGA AGCTCGCGAC GAATACACCA AGGTCGGCGG CGCAGCCAAA
GTCCGCTTGT TCGATACCAT CGTGAAAGTG GGTGATGTCT TCCCATCGAC CCCGGTCGTC
GCATCGGGTG ACTCTCGCCT GCTGCCAGAG AGTTTCCGCG GTGTGACCGT TGAGAACACC
AGCATCCAGG GCCTTACCCT CCAGGGTGGT CGTCTGCATG CGATGAGCCA GCCGGTCTCA
AGCAACCTGA ACGACAACTT CGTGACGTTC TACGGCGGCC CGGTCAACTC GCCATGGATC
GGTTACGGTG GCGGTGACTA CTCGATCAAC GACAACTGGA CTGTGAGCGT CTACGCCAGC
CAGCTGAAAG ACGTCTGGAA TCAGTACTAC GCCGGCACAA GCGTGGTTTA CCCGCTGAGC
GACGATCTGG CGCTGATCGG TGGCTTCAAC TACTACAAAG CCGTAGATGA AGGTAAGAAG
CGCCTGGGTG AATTCGACAA CAACATCTGG AGTGCCAAGG TCGGTGTGCG TTACGGTGCC
CACACCCTGG CCCTGTCGCA TCAGCGCAAC AACGGCGACG ACGATTTCGA CTACCTGCGT
CAGTCGGACT CGATTTTCGT CGACAACTCC ATCCAGTACA GCGACTTCAA CTCGCCGAAA
GAGCGTTCCT GGATGCTGCG CTATGACCTG AACTTCACCA GCTACGGCAT TCCAGGCCTG
ACGTTCATGA CGCGCTACGC CAGAGGCTCG GGTGCGGATT ACTCGAACGC TAACCAGTTC
TACATGCGCA CCGACGACAA CGGCAACCCG CTCGACAATC AGAAGCGTTG GGAGCGTGAC
GTCGAAGTCA AATACGTTGT CCAAACCGGT CCGGCAAAAG ATCTGTCCTT CCGGTTGCGC
CAGGCAACCA CGCGTGCCAC TGCTTTCGAA TCGGATCTGG ATGAAACTCG TGTAATCATC
GAGTACCCGC TTTCGATTCT GTAA
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| Protein sequence | MKIKVPLYLA AVSALSGSYA ISAQAEDKPE GFIEGSSLTV LNRNFYFNRD NRDSTAPTYN
SGKGNTNGYS EAWAHAIISK FNSGFTQGTV GFGVDAFAMI GLKLDTGDGR NGGRSSFDVL
PVDNKGEARD EYTKVGGAAK VRLFDTIVKV GDVFPSTPVV ASGDSRLLPE SFRGVTVENT
SIQGLTLQGG RLHAMSQPVS SNLNDNFVTF YGGPVNSPWI GYGGGDYSIN DNWTVSVYAS
QLKDVWNQYY AGTSVVYPLS DDLALIGGFN YYKAVDEGKK RLGEFDNNIW SAKVGVRYGA
HTLALSHQRN NGDDDFDYLR QSDSIFVDNS IQYSDFNSPK ERSWMLRYDL NFTSYGIPGL
TFMTRYARGS GADYSNANQF YMRTDDNGNP LDNQKRWERD VEVKYVVQTG PAKDLSFRLR
QATTRATAFE SDLDETRVII EYPLSIL
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