Gene PputGB1_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0045 
Symbol 
ID5867733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp47798 
End bp48385 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content59% 
IMG OID641545118 
Producthypothetical protein 
Protein accessionYP_001666297 
Protein GI167031066 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.535181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACA TAGAGCCCTG GGCAGTTGCT ATCGGTGACT TTCGCCGCTG CACTGAAAAA 
CTCACTGTCC AGCTCGATGA GCTGACCTCG CAGACGCGCA CCTCCAGCGC TGTTCTGGAG
AGGTCGAACG AACTGGTGGA GCAGGTGGAC GCTGTCGGCC GGCAGATTCA GGAGGAGGTG
CGAAAGGCGG AGAAGGCTTG GTCGAACGCG GAGGAGGTTG CCTTGCGCGC CGCTGCATCA
GCGTATTCAG CTGCATGCCG CGGAGTCGAC ACCGCCATCC AGCCACTGAT CTCGGAGCTT
ACAGCAGCGA CAAAGGCGGC GGACGCCTCT ATCCAGGAGC TCAAGCGGGC ACCGGTGCTG
GCCAAGCGTT ATGTGATGGT GGTCGCCACG GCGTTCTTCA TTCTGGCGCT GATCTGTGTC
TACTCGACCA TGCGCCTGAT CGATGCCGCC GGCAGCGTAA GTGCTCAAGA GAAAGTGAAT
GCTCAGTACT TCTCACACCT GTGGAAAAAC GCCAATCCTG ACGAACAGAA GATTATTAAG
TCGGTGATTC TGCGGTCGCC CATGGACCCT GTGGTCCTTC GGCACTGA
 
Protein sequence
MNDIEPWAVA IGDFRRCTEK LTVQLDELTS QTRTSSAVLE RSNELVEQVD AVGRQIQEEV 
RKAEKAWSNA EEVALRAAAS AYSAACRGVD TAIQPLISEL TAATKAADAS IQELKRAPVL
AKRYVMVVAT AFFILALICV YSTMRLIDAA GSVSAQEKVN AQYFSHLWKN ANPDEQKIIK
SVILRSPMDP VVLRH