Gene PputGB1_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0025 
Symbol 
ID5868024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp28565 
End bp28912 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content57% 
IMG OID641545098 
Producthypothetical protein 
Protein accessionYP_001666277 
Protein GI167031046 
COG category[S] Function unknown 
COG ID[COG5569] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.130406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC TACTGATCAG CGCTGGCCTG GTGTTCGCCG TTGCGGCGGC GGTGCAGGCC 
CAAGACATGT ATGGCACGGA TATGAAGAAT ATGCCCATGG AAGGCAACGA GACCCAAGGC
AGCCAGGCGG CTCCGACTGC ATCGGCTGAG GGAACCATCA AAGCTTTGGA ACCAGGTAAA
GTTACCTTGG CGCATGGACC AGTATCAGCC CTGAAATGGC CGGCAATGAC CATGGGCTTC
AGCGCTACCG AGCAGCAACT CAAGGGACTC AAGGTAGGCG ACAAGGTCAG CTTCGATTTC
CGAATGAATG GGGGCACAGC GACGATCGTA GGCATTCGCA AGCAGTGA
 
Protein sequence
MKKLLISAGL VFAVAAAVQA QDMYGTDMKN MPMEGNETQG SQAAPTASAE GTIKALEPGK 
VTLAHGPVSA LKWPAMTMGF SATEQQLKGL KVGDKVSFDF RMNGGTATIV GIRKQ