Gene PputGB1_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0019 
Symbol 
ID5868018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp20143 
End bp20820 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content56% 
IMG OID641545092 
Producttwo component heavy metal response transcriptional regulator 
Protein accessionYP_001666271 
Protein GI167031040 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR01387] heavy metal response regulator 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.593373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAC TCGTAGCCGA AGATGAGCCA AAAATCGGGG CCTACCTGCA GCAAGGGCTG 
ACGGAGGCAG GCTTTACCGT CGATCGTGTG GTCACAGGGA CCGACGCGCT GCAATACGCT
TTGAGCGAGG CGTATGACCT GCTGATTCTT GATGTAATGA TGCCGGGGCT AGACGGCTGG
GAGGTGCTGC GGATGGTACG TGCGGCAGGG AAAGAGGTCC CAGTCTTGTT TTTGACGGCC
CGTGATGGCG TGGACGATCG CGTGAAAGGG TTAGAACTCG GGGCTGACGA TTACCTGGTC
AAACCCTTTG CATTCTCGGA ACTGCTAGCG CGTGTGCGCA CTTTGCTGCG AAGAGGCAGC
AGTGGCTATG CTCAGACCAC TATGAAGATG GCTGACCTGG AGGTAGACCT GCTTAAGCGC
CGGGCCACCC GAAATGGCAA GCGGATCGAC CTCACAGCCA AGGAGTTCTC CTTACTGGAA
CTACTCATGC GCCGACGCGG CGAGGTACTG CCGAAGTCCC TGATCGCATC GCAGGTGTGG
GATATGAACT TCGACAGCGA CACTAACGTG ATCGAGGTTG CTGTTCGTAG GTTGCGGGCC
AAGATTGATG ACGATTTCGC CCCCAAGCTC ATACATACAG TTCGTGGCAT GGGCTATCTG
ATGGATGTTC CCGAGTAA
 
Protein sequence
MKLLVAEDEP KIGAYLQQGL TEAGFTVDRV VTGTDALQYA LSEAYDLLIL DVMMPGLDGW 
EVLRMVRAAG KEVPVLFLTA RDGVDDRVKG LELGADDYLV KPFAFSELLA RVRTLLRRGS
SGYAQTTMKM ADLEVDLLKR RATRNGKRID LTAKEFSLLE LLMRRRGEVL PKSLIASQVW
DMNFDSDTNV IEVAVRRLRA KIDDDFAPKL IHTVRGMGYL MDVPE