| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0006 |
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| Symbol | gyrB |
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| ID | 5868005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4952 |
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| End bp | 7372 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641545079 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_001666258 |
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| Protein GI | 167031027 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA ATCAAACGTA CGACTCCTCC AGCATCAAGG TGCTGAAAGG TTTGGATGCC
GTACGCAAGC GTCCCGGCAT GTACATTGGC GACACCGATG ATGGTAGCGG CCTGCACCAC
ATGGTCTTCG AGGTGGTCGA CAACTCGATC GACGAAGCCC TCGCCGGGCA CTGCGATGAC
ATCACCGTCA TCATCCACAC GGACGAATCC ATCAGCGTGC GCGACAACGG TCGTGGCATT
CCGGTCGACG TACATAAAGA AGAAGGCGTT TCTGCGGCAG AGGTCATCAT GACCGTACTG
CACGCCGGCG GTAAGTTCGA TGACAACTCC TACAAAGTAT CCGGCGGTCT GCACGGTGTA
GGTGTATCGG TTGTTAACGC CCTGTCCGAG AAGCTGGTTC TGACCGTTCG CCGTAGCGGC
AAGATCTGGG AACAGACCTA CGTTCACGGT GTTCCACAAG CGCCTATGGC GGTTGTCGGT
GACAGCGAAA CCACCGGTAC CCACATCCAC TTCAAGCCAT CGGCTGAAAC CTTCAAGAAT
ATTCACTTCA GCTGGGACAT CCTGGCCAAG CGTATTCGTG AGTTGTCGTT CCTCAACTCG
GGCGTTGGCA TTCTGCTGAA GGATGAGCGC AGCGGTAAGG AAGAGTTCTT CAAGTACGAA
GGCGGCCTGC GTGCGTTCGT CGAGTACCTG AACACCAACA AGACGCCGGT CAACTCCCAG
GTATTCCACT TCAACGTCCA GCGCGACGAT GGCGTGGGTG TTGAGGTCGC TCTGCAGTGG
AACGACAGCT TCAACGAAAA CCTGCTGTGC TTCACCAACA ACATTCCGCA GCGTGACGGC
GGTACCCACT TGGTGGGCTT CCGGTCCTCG CTGACCCGTA GCTTGAACAG CTACATCGAG
CAGGAAGGCT TGGCCAAGAA GAACAAGGTG GCAACCACCG GCGACGACGC CCGTGAAGGC
CTGACCGCGA TCATCTCGGT GAAGGTGCCG GACCCCAAGT TCAGCTCGCA GACCAAGGAC
AAGCTGGTCT CCTCGGAGGT GAAAACCGCC GTGGAACAAG AGATGAACAA GTACTTCGCC
GACTTCCTGC TGGAAAACCC GAACGAGGCC AAGGCCGTCG TTGGCAAGAT GATCGACGCC
GCCCGCGCCC GTGAAGCCGC GCGTAAAGCC CGTGAGATGA CTCGCCGCAA AGGGGCGCTG
GATATCGCTG GCCTGCCGGG CAAGTTGGCG GATTGCCAAG AGAAGGACCC TGCCCTCTCT
GAACTGTACC TGGTGGAGGG TGACTCCGCG GGTGGCTCGG CCAAGCAAGG TCGTAACCGT
CGTACCCAGG CGATCCTGCC GTTGAAGGGT AAAATCCTCA ACGTCGAGAA AGCGCGTTTC
GACAAGATGA TCTCGTCCCA GGAAGTGGGC ACGCTGATCA CTGCGCTGGG CTGCGGTATT
GGCCGCGAAG AGTACAACAT CGACAAACTG CGTTATCACA ACATCATCAT CATGACCGAT
GCTGACGTTG ACGGTTCGCA CATCCGTACC CTGCTGCTGA CCTTCTTCTT CCGTCAGTTG
CCGGAGCTGG TCGAGCGCGG CTACATCTAC ATTGCCCAGC CACCGTTGTA CAAGGTGAAG
AAGGGCAAGC AGGAGCAGTA CATCAAGGAC GACGAGGCCA TGGAAGAGTA CATGACCCAG
TCGGCCCTGG AGGATGCCAG CCTGCACCTG GACGAATCGG CACCTGCGGT TTCCGGTGTG
CAGCTGGAAG CACTGGTGAA TGAATTCCGT AGCGTAATGA AGACGCTCAA GCGCCTGTCG
CGCTTGTATC CGGAAGAGCT GACCGAGCAC TTCATCTACC TGCCGGAGGT GACCCTGGAG
CAGTTGGGTG ACCACGCGGT GATGCAAGCC TGGCTGGCTA AGTTCCAGGA GCGTCTGAAC
AGCAGCCAGA AGTCTGGCCT GGTTTACAAA GCCAGCCTGC GCGAAGACAA AGAGCGCAAC
GTATGGCTGC CAGAAGTGGA AGTCACCTCT CACGGCCTGG CCAGCTACGT CACCTTCAAC
CGCGACTTCT TCGGCAGCAA TGACTACCGT ACCGTGGTCA ACATTGGCTC CAAGCTGTCC
AGCCTGTTGG GTGAAGGTGC TTACGTTCAG CGCGGTGAAC GCCGCAAGGC AATTGTCGAG
TTCAAGGAAG GCCTGGATTG GCTGATGAAC GAGACAACCA AGCGCCACAC TATCCAGCGA
TACAAAGGGC TGGGTGAAAT GAACCCGGAC CAGCTGTGGG AAACCACCAT GGACCCGACC
GTTCGCCGTA TGCTGAAGGT CACTATCGAA GATGCAATCG CTGCGGACCA GATCTTCAAC
ACCCTGATGG GGGACGCGGT CGAGCCGCGT CGTGACTTCA TCGAAAGTAA CGCGCTGTCG
GTGTCGAACC TGGACTTCTG A
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| Protein sequence | MSENQTYDSS SIKVLKGLDA VRKRPGMYIG DTDDGSGLHH MVFEVVDNSI DEALAGHCDD
ITVIIHTDES ISVRDNGRGI PVDVHKEEGV SAAEVIMTVL HAGGKFDDNS YKVSGGLHGV
GVSVVNALSE KLVLTVRRSG KIWEQTYVHG VPQAPMAVVG DSETTGTHIH FKPSAETFKN
IHFSWDILAK RIRELSFLNS GVGILLKDER SGKEEFFKYE GGLRAFVEYL NTNKTPVNSQ
VFHFNVQRDD GVGVEVALQW NDSFNENLLC FTNNIPQRDG GTHLVGFRSS LTRSLNSYIE
QEGLAKKNKV ATTGDDAREG LTAIISVKVP DPKFSSQTKD KLVSSEVKTA VEQEMNKYFA
DFLLENPNEA KAVVGKMIDA ARAREAARKA REMTRRKGAL DIAGLPGKLA DCQEKDPALS
ELYLVEGDSA GGSAKQGRNR RTQAILPLKG KILNVEKARF DKMISSQEVG TLITALGCGI
GREEYNIDKL RYHNIIIMTD ADVDGSHIRT LLLTFFFRQL PELVERGYIY IAQPPLYKVK
KGKQEQYIKD DEAMEEYMTQ SALEDASLHL DESAPAVSGV QLEALVNEFR SVMKTLKRLS
RLYPEELTEH FIYLPEVTLE QLGDHAVMQA WLAKFQERLN SSQKSGLVYK ASLREDKERN
VWLPEVEVTS HGLASYVTFN RDFFGSNDYR TVVNIGSKLS SLLGEGAYVQ RGERRKAIVE
FKEGLDWLMN ETTKRHTIQR YKGLGEMNPD QLWETTMDPT VRRMLKVTIE DAIAADQIFN
TLMGDAVEPR RDFIESNALS VSNLDF
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