| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_2149 |
|---|
| Symbol | |
|---|
| ID | 5876168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | + |
|---|
| Start bp | 2151039 |
|---|
| End bp | 2151614 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641542503 |
|---|
| Product | lytic transglycosylase, catalytic |
|---|
| Protein accession | YP_001663757 |
|---|
| Protein GI | 167040772 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.213234 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGGGA TTGAATTGAC AAATATTGTA AATCAAATAA TTGAAAATAA ATTTAGAGAA
ATTCAAAGCA GACTCCCTGC TAATATAAAA ATATTTAACA CTGATAAACC TTTTGCTGAA
GTTTTAAACA ATGCTATAGA AAATCAACAA TACAATGCAG GAAATGTAAG TAATAATACG
CCATCAAAAA ATACAAATTT ACAACAAATT GAAGATTTAA TACAACAGGC CAGTCAAAAA
TATAATGTAG ATGCAAATCT CATCAGAGCC GTCATCAAAG CAGAGTCTAA TTTTAATCCA
TTCGCAGTTT CTTCTGCAGG AGCGATGGGA CTTATGCAGC TTATGCCTTC AACTGCAAAG
GAGTTAAATG TATCCAATCC TTTTGACCCT TCTCAAAATA TAGATGGAGG AGTAAGATAC
CTAAAAAATT TGTTAGACAC TTACCATGAC ATAAGATTAG CATTAGCTGC ATATAATGCT
GGTCCTCAAT CAGTAGAAAA ATATCAAGGT ATTCCCCCTT ACCAAGAAAC TATAAATTAT
ATAAACAAAA TTTTAAATGA CTTATATAAT AAATAA
|
|---|
| Protein sequence | MGGIELTNIV NQIIENKFRE IQSRLPANIK IFNTDKPFAE VLNNAIENQQ YNAGNVSNNT
PSKNTNLQQI EDLIQQASQK YNVDANLIRA VIKAESNFNP FAVSSAGAMG LMQLMPSTAK
ELNVSNPFDP SQNIDGGVRY LKNLLDTYHD IRLALAAYNA GPQSVEKYQG IPPYQETINY
INKILNDLYN K
|
|---|
| |