| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1764 |
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| Symbol | dapF |
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| ID | 5875998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoanaerobacter sp. X514 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010320 |
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| Strand | - |
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| Start bp | 1767424 |
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| End bp | 1768233 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641542111 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001663386 |
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| Protein GI | 167040401 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATGGAT TGGGAAATGA CTTTATAGTA ATTGAGGCTC GAGAAAATGT AGATTATAGT
GAATTAGCTA TTAAACTTTG TGATAGGCAT TTTGGTATAG GGGCGGATGG TCTTTTAGTC
GTTGAGCCTT CAGGAATTGC GGATATTAGG ATGAGGATTT TTAATGCAGA TGGTAGCGAA
GCAGAAATGT GCGGTAATGG TTCTAGGTGT TTTGCAAAAT ATGTTTATGA AAGAGGGATA
GTAAAAAAAG AGAAAATGGC AGTGGAAACC TTAGCGGGAG TGATTATGCC AGAAGTTTTT
GTAGAAAATG GGAAAGTAGA AAGTGTAAAA GTTTACATGG GTAGTCCTAT TTTTGAGGCT
AATAAAATAC CTGTAAAAAC TGATAAGCAA AAATTTATAA ATGAGCCGGT AAAAATAGAT
GGGAAAGTTT ATAAATTAAC TTCTATAAGA GTAGGAGTGC CTCATACTAT TGTTTTTGTA
AAATCCTTAG ATGAAAATAT GATTAAAGAA TTAGGTCCTA AAATTGAAAA ATCTTCCATT
TTTCCTCAAG GTACAAATGT GGATTTTGTA AAAGTAGAAG ATAAAGAAAA TATTTCTGTA
AGGACTTGGG AAAGAGGTGT GGGGCTTACT CTTGCCTGTG GAAGTGGTGC CTGTGCCTCT
GCAGTAGCTT CAGCAGTTTT AGGTAAGACG GAGCGAAATG TCAATGTCCA TTTTAAAGGT
GGTAAACTTT TAGTAGAATG GCTGGATGAC AATAGTATTT ATTTATCTGG AAGTGTGGAA
GAAGTCTTCA GGGGCGAAAT AGAGCTTTAG
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| Protein sequence | MHGLGNDFIV IEARENVDYS ELAIKLCDRH FGIGADGLLV VEPSGIADIR MRIFNADGSE
AEMCGNGSRC FAKYVYERGI VKKEKMAVET LAGVIMPEVF VENGKVESVK VYMGSPIFEA
NKIPVKTDKQ KFINEPVKID GKVYKLTSIR VGVPHTIVFV KSLDENMIKE LGPKIEKSSI
FPQGTNVDFV KVEDKENISV RTWERGVGLT LACGSGACAS AVASAVLGKT ERNVNVHFKG
GKLLVEWLDD NSIYLSGSVE EVFRGEIEL
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