Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_1700 |
Symbol | |
ID | 5877347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | - |
Start bp | 1709588 |
End bp | 1711669 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641542047 |
Product | DNA topoisomerase I |
Protein accession | YP_001663322 |
Protein GI | 167040337 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA [COG0551] Zn-finger domain associated with topoisomerase type I |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial [TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00616947 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAT CTCTCGTTAT TGTGGAATCT CCAGCTAAAG CTAAGACCAT CTCTAAATTT TTAGGCAAAA ATTTTAAAGT AGCAGCCTCC ATGGGACATG TTAGGGATTT GCCTAAAAGT CAATTAGGTA TCGATATTGA AAATAATTTT GCTCCTAAGT ACATAACTAT CAGGGGAAAA GGGGCTATTA TAGAGAATTT AAAAAAAGAA GCAAAGGATG CAGATAAAAT TTTTTTGGCC ACTGACCCTG ACAGAGAAGG AGAAGCAATT TCCTGGCATA TTGCCCAATT GTTAAATTTG AATATTGAGG AGCCTTGTCG CATAGAATTT CACGAGATTA CAAAAAATGC AGTGCAAACT GCTCTTAAAA GCCCTCGCTC TATAGATTTA AATTTGGTAG ATGCGCAACA AGCCAGGAGA ATTCTTGATA GATTGGTAGG ATATAAAATA AGTCCCCTTC TTTGGAAAAA AATAAAGAGG GGACTAAGTG CAGGCAGAGT TCAATCAGTA GCAGCTAGGC TTATCTGCGA CAGAGAAAGA GAAATAGAAG CCTTTGTGCC AGAAGAATAT TGGAGTATTA CCGCGATTCT CTCTGATGAG AAAAACTCTG GCAAGTTTGA GGCAAAATTC TACGGTACCA GAGAGGATAA AGTTGAGTTA AAGACAAAAG AAGATGTAGA CAAAATATTA GCAGCATTGT CTGAAGAATA CATTATAGAT AAAGTAAAAA CAGGTGTAAA AAAGAGGAAT CCTTCTCCAC CTTTTATCAC TAGTACTTTG CAACAAGAAG CTTCGAGAAA ATTGGGATTT ACTGCAAAAA AAACTATGTT AATCGCACAA CAATTATATG AAGGCGTAGA AATCAAAGGA GAAGGCAGTG TAGGTCTTAT TACTTATATA AGGACTGATT CTACAAGAGT CGCAAATGAA GCTAAGGCTG AAGTCTATAA ATACATAGTT GAAAAGTTTG GAAAAGAGTA TACCAATCCT GAAGCAAATT ATGCTTCTAA AAGAGCCAAT GTACAGGATG CTCACGAGGC TATAAGACCT ACTTCTATTT ATAGGGATCC GGAAAGTATA AAAGATTCTC TAACGCCAGA CCAATATAAA TTGTACAAAC TAGTTTGGAG TAGATTCCTA GCAAGTCAAA TGGCACCTGC GATTTACGAT ACTGTTTCTA TGGATATAGT AAATAATGGA TATGTTTTTA AAGCCTCCGG TTCTAGCATT AAATTTTTAG GTTTTATGAC AGTGTATGTA GAAGGAACAG ATATGCAAGA AGAGGAAGAA AAAACTGTAC CTGTGCTTCA AGAAGGAACC AAATTGTTTT TAGAGGAATT AAAGCCAATG CAACATTTTA CCCAGCCTCC GCCTCGATAT ACAGAAGCTT CTTTGATTAA AGAATTAGAA GAAAAAGGAA TAGGCCGTCC CAGTACTTAT GCTCCTACTA TCTCTACTTT GTTAGAAAGA GGATATGTGG TAAAAGATAA AAAGAATTTA AAACCTACAG AATTAGGTTT TATTGTGACA GACGCATTAA AGGAGTTCTT TTCCAAAATT GTAGATGTAA AATTTACTGC TGAGATGGAA GAGCAGCTGG ATAAGATTGA AGAAGGTCAA GTGAAGTGGT ATGAAGTGGT GCAAGAGTTT TATGAAGACT TTTATAATAC TTTGAAAATT GCTGAAGAAC AAATGGAAGA GATAGACGTA AAGGAAGAAG TAGAAGTAAC TGACATTAAA TGTGAACTTT GCGGGAGAAA TATGGTTGTA AAGAAAGGCA GGTATGGAAA ATTTCTTGCT TGTTCTGGTT TTCCTGAATG TAAAAATACA AAACCTTTGT ACGAAAAGGT TGGTGTGAAA TGCCCTAAAT GTGGTGGAGA AATTGTAAAG AAAAAGAGCA AAAAAGGGCG AACGTATTAC GCTTGCGAAA ATGCACCTAA TTGCGATTTC ATATTGTGGG ATAAGCCCGT TGATGAAAAA TGTCCTGTTT GTGGTAGCTT GTTAGTAGAA AAAAATACAA AAAATGGTCA TATACTAAAA TGCTCTAATC CAGAATGTGA TTATCAAAAA GAAGTTAAAT GA
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Protein sequence | MAKSLVIVES PAKAKTISKF LGKNFKVAAS MGHVRDLPKS QLGIDIENNF APKYITIRGK GAIIENLKKE AKDADKIFLA TDPDREGEAI SWHIAQLLNL NIEEPCRIEF HEITKNAVQT ALKSPRSIDL NLVDAQQARR ILDRLVGYKI SPLLWKKIKR GLSAGRVQSV AARLICDRER EIEAFVPEEY WSITAILSDE KNSGKFEAKF YGTREDKVEL KTKEDVDKIL AALSEEYIID KVKTGVKKRN PSPPFITSTL QQEASRKLGF TAKKTMLIAQ QLYEGVEIKG EGSVGLITYI RTDSTRVANE AKAEVYKYIV EKFGKEYTNP EANYASKRAN VQDAHEAIRP TSIYRDPESI KDSLTPDQYK LYKLVWSRFL ASQMAPAIYD TVSMDIVNNG YVFKASGSSI KFLGFMTVYV EGTDMQEEEE KTVPVLQEGT KLFLEELKPM QHFTQPPPRY TEASLIKELE EKGIGRPSTY APTISTLLER GYVVKDKKNL KPTELGFIVT DALKEFFSKI VDVKFTAEME EQLDKIEEGQ VKWYEVVQEF YEDFYNTLKI AEEQMEEIDV KEEVEVTDIK CELCGRNMVV KKGRYGKFLA CSGFPECKNT KPLYEKVGVK CPKCGGEIVK KKSKKGRTYY ACENAPNCDF ILWDKPVDEK CPVCGSLLVE KNTKNGHILK CSNPECDYQK EVK
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