| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1650 |
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| Symbol | polC |
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| ID | 5878063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoanaerobacter sp. X514 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010320 |
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| Strand | - |
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| Start bp | 1665897 |
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| End bp | 1670120 |
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| Gene Length | 4224 bp |
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| Protein Length | 1407 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641541997 |
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| Product | DNA polymerase III PolC |
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| Protein accession | YP_001663272 |
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| Protein GI | 167040287 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01405] DNA polymerase III, alpha chain, Gram-positive type
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00795258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCAG CATCTTTTCC GCAGGAATTT GAAATAAAAA AAGTAAAACT GTTAAAAAAA
GATAGAAAAT TAATTGTAAG CGTATCTTCC AATAATAACG TAAATTCTCA GATAAGAAAA
TTCCAGGATT TTTTGCTTAA TAAATTTCCT TTAATTAAAG AAGTAGAAGT CGTAGTAGAA
CAGGAGAAAA AATTTAATAG TCTTCAAGAC ATAATAGACA ATTTTGAGGA AATAATCTTA
AAACTAAGCG AGGAATACCC TGCTTCTCTT AGTTTTTTAA AAACCTGTGA TATAGTAACA
GAAAATCAAA AGATAATAAT TAAAGCTCCA AATGAAGTAA TATATGAATT TATAAAAAGC
AATAAAATGG ACTTTATTCT TAAGGAATTT TTACAGAAAG AATATGGGCT TAAAACAGAA
ATAGATGTAG TCCTTTTAGA AGAGTTTGAA GATACAATGG AAAGAATGAT AATGGAGGAA
GATATAAAAG TTATTGAAGA AATCACTAAA AGCGGGCAGA AGCAAGAAAC CGGCAAAACA
ACAGAAAAAA TGGAGGATAA AGAAGATTCC CAAGTACTTT TAGGAAAGGA AATAAAAGCT
GAAGCAATAT CTATCAAAGA TATTACTGCA GAAACAGAAG AAGCGATAAT TGAAGGTGAA
ATCTTTTCTC TCGAATTTAA GGAATTAAAG TCTAAAATTT TAATGACTTT TGATATAACT
GATTATACTT CATCGATACT TGTAAAAGCC TTTTTAACTG AGGAAAAGTA TAATTCTTTA
AAAGAAAATA TTCAAGTAGG CGGTTTTGTA AAATTAAGAG GGAAAGTTTT CTACGACAAA
TATGAAGGAG ACTTAGTAAT AAGTTTAAAA GACCTGCAGT TGATATCTCC GAAAGAAAGA
AAAGATTTAA GTGAAGAAAA AAGAGTGGAA CTTCACTTAC ACACTCAAAT GAGCAGTATG
GATGCAGTAG CCTCTGCAAC AGAAGTGATT AAAAGAGCAG CAAAATGGGG ACATAAAGCC
ATTGCTATAA CAGACCATGC AGTTGTACAG GCATTTCCTG AAGCGATGGA AGCATCTTCT
AAATACGGTG TAAAAGTCAT ATACGGTGTA GAAGGTTATT TAGTGGATGA TGGTGTACCT
ATTGTAACAG GAGATACAGA AGCCACTTTA GAAGATGAAT TTACTGTTTT TGATATAGAG
ACGACGGGTC TTTCCAATAT AAATGATGAA ATAATTGAAA TTGGTGCAGT AAAAATAAAA
GAAGGCAAAA TAATAGATAC TTTTGAAACC TTTGTTAATC CCAAAATCCC TATTTCTTCT
TTTATAACAA AACTTACTGG AATTGATGAA TCTATGGTTA AAGATGCTCC TTCTATAGAA
GAAATATTAC CTAAATTCTT GGAGTTTGCT TCTAATAGTG TTTTAGTAGC TCATAATGCA
AATTTTGATG TGTCTTTTAT AAAATCTAAA GCTAAAAAAT TTAATTTAAA TGTAAACAAT
GCAGTTTTAG ATACCTTAGA ACTAAGTAGA CATTTATATA AGGACTTGAA AAATTACAAG
CTAGACACAC TGGCTGAGCA TTTACAAGTA AAATTGGAAC ACCACCACAG AGCAGTAGAC
GATGCTATGG CTACAGCTGA AATATTTATA AAAACTATTG ATAGGTTAAA AGAATTAGGA
GTAGAAAAAG TAAAAGATAT AAATGCTATA TTAAAAGAAA GTGAAGTTGA CATACGGAAA
CTTCCTGTCT ATCATGTCAC GATTTTGGTA AAAGACCAAA AAGGATTGAG AAATTTATAC
GAAATAATCT CTAAATCCAA TTTGGAATAT TTTCATAGAA CACCTCGTAT TCCCAAAAGT
TTACTTATTA GTAGGAGAGA AGGTCTTATC ATTGGTTCTG CTTGCGAACA AGGGGAAGTT
TTTAGGGCGA TTGTATCTAA CTTAGAAGAA AAGAAACTAG AGAATATTAT TTCTTTTTAC
GATTATTTAG AAGTACAGCC TGTTGGAAAT AATGAGTTTT TAATTGGAAA AGGAGAAGTA
AAAAGCGTAG AAGAATTAAG AGAAATCAAT CGAAAAATTT ACCTTTTAGG TAAAAAATAC
AACAAATTAA TAGTGGCAAC AGGAGATGTG CACTTTTTAG ATCCATGGGA TGATATATAC
AGAAAAATTT TAATGGCAGG AAAAGGATAT AAGGATGCAG ATAGGCAGCC GCCTTTGTAT
TTTAAAACAA CTGATGAGAT GCTAAAAGAA TTCGAATATT TAGGAGAAGA AGTAGCGAAA
GAGATTGTAA TTGATAATCC TAATAAAATT GCTGACCTTG TAGAAGAAGT AAAACCTATA
CCAGATGGAA CATTCCCTCC TGTGATAGAG GGAGCTGAAG AAGAATTAAG AAGGCTTACT
TTAGATAAAG CCCATGAAAT ATACGGTGAC CCTTTACCAG AAATAGTACA AAATCGCTTA
GATAGAGAAT TAAATTCTAT AATTAACAAT GGATATGCAG TTATGTATAT TATAGCTCAA
AAATTAGTGT CTAAGTCTTT AAAAGATGGG TATTTGGTTG GTTCTAGAGG TTCTGTAGGC
TCTTCTTTAG TAGCCACTAT GAGCGGAATA ACAGAAGTTA ACCCGCTGCC GCCTCATTAT
GTTTGTCCAA ATTGTAAGTA TTCCGAGTTT ATAACTGATG GAAGCTATGG TTGTGGTGTG
GACATGCCGG ATAAGACTTG TCCTCACTGT GGAACTTTGA TGAGGAAAGA TGGTTTTGAT
ATACCCTTTG AAGTGTTTTT AGGTTTTGAA GGGGATAAAG AACCAGATAT AGACCTTAAT
TTTTCTGGGG AATACCAACC TATTGCTCAT AAGTATACAG AAGAACTTTT CGGAAAAGGC
CATGTTTTTA GAGCAGGTAC TATTGGAACT TTAGCAGATA AAACTGCTTA TGGATATGTC
AAAAAATATT TTGAAGAACG CAATTTAATA GTTCATAAAT CAGAAATCAA AAGACTTACT
GTTGGTTGTA CAGGAGTGAA AAGAACCACA GGGCAACATC CAGGTGGAAT AATGGTAGTT
CCAAAGGACA AGAGTATTTA TGACTTTACT CCAATACAGC ATCCTGCTGA TGCAGAAGAC
ACCGATGTTA TAACAACTCA TTTTGACTAC CATTCAATAA GCGGAAGGCT TTTAAAACTG
GATATTTTAG GGCATGATGA CCCTACAGTT ATAAGAATGC TGGAGGATTT AACCGGCATT
AATGCAAGAG AAATTCCTTT AGATGATAAA AAAACTATGA GTTTATTTAC CAGTGTAGAA
GCATTGGGAA TAGACCCTGA AGAGCTAAAT ACTCCTGTGG GTACTTTAGG ATTACCTGAG
TTTGGTACGA AGTTTGTAAG ACAAATGCTT ATTGACACTC GTCCTACTAC TTTTGCAGAA
CTAGTACGCA TAAGTGGACT TTCTCACGGC ACTGATGTAT GGCTTAACAA TGCTCAGGAT
ATAATAAGAG AAGGAATAGC TACATTAAAA GAAGTAATAT CTACAAGAGA TGACATAATG
CTTTATTTGA TAAGCAAAGG TATGGACAAA AAATTGTCTT TTAAAATAAT GGAAAATGTG
AGGAAAGGCA AAGGTGTAAC ACAAGAAGAA ATAGAAGAAA TGAGAAAACA CGGTGTTCCA
AATTGGTTTA TTGAGTCTTG CCAAAAAATA AAATATATGT TTCCGAAGGC TCATGCTGTG
GCATACGTAA TAATGGCATT TCGAATTGCT TATTTTAAAG TTCATTATCC AGAAGCCTTT
TATGCTACTT ACTTTACCGT TAGAGCAGAT GACTTTAATT TGGATATTGT ATTAAAAGGG
AAAGACAGCA TAAAAAATGC TATAAAAGAG ATAGAAGCGA AAGGAAATAA TGCTAGTCCT
AAAGAAAAAA GCCTTTTAAC AGTATTAGAA GTAGCTTTAG AGATGTACTT AAGAGGATTT
AAGTTTATAA ATGTAGACTT ATATAAATCT GATGCTGTCA AATTTTTGAT TACTGAAGAA
GGATTGCTAC CACCTCTTAA TTCGTTAGAA GGAGTAGGAA TACAAGCAGC CAAAACAATT
GCGCAAGAAA GAGAAAATGG CAAATTTCTA TCTGTTGAAG ATTTTAGAAA CAGGACAAAG
GTCAGTAAAA CGGTTATAGA AATATTAAAA CAACATGGCT GTTTAATTGA TTTGCCAGAA
TCTAATCAAT TAAGTTTATT TTAG
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| Protein sequence | MIPASFPQEF EIKKVKLLKK DRKLIVSVSS NNNVNSQIRK FQDFLLNKFP LIKEVEVVVE
QEKKFNSLQD IIDNFEEIIL KLSEEYPASL SFLKTCDIVT ENQKIIIKAP NEVIYEFIKS
NKMDFILKEF LQKEYGLKTE IDVVLLEEFE DTMERMIMEE DIKVIEEITK SGQKQETGKT
TEKMEDKEDS QVLLGKEIKA EAISIKDITA ETEEAIIEGE IFSLEFKELK SKILMTFDIT
DYTSSILVKA FLTEEKYNSL KENIQVGGFV KLRGKVFYDK YEGDLVISLK DLQLISPKER
KDLSEEKRVE LHLHTQMSSM DAVASATEVI KRAAKWGHKA IAITDHAVVQ AFPEAMEASS
KYGVKVIYGV EGYLVDDGVP IVTGDTEATL EDEFTVFDIE TTGLSNINDE IIEIGAVKIK
EGKIIDTFET FVNPKIPISS FITKLTGIDE SMVKDAPSIE EILPKFLEFA SNSVLVAHNA
NFDVSFIKSK AKKFNLNVNN AVLDTLELSR HLYKDLKNYK LDTLAEHLQV KLEHHHRAVD
DAMATAEIFI KTIDRLKELG VEKVKDINAI LKESEVDIRK LPVYHVTILV KDQKGLRNLY
EIISKSNLEY FHRTPRIPKS LLISRREGLI IGSACEQGEV FRAIVSNLEE KKLENIISFY
DYLEVQPVGN NEFLIGKGEV KSVEELREIN RKIYLLGKKY NKLIVATGDV HFLDPWDDIY
RKILMAGKGY KDADRQPPLY FKTTDEMLKE FEYLGEEVAK EIVIDNPNKI ADLVEEVKPI
PDGTFPPVIE GAEEELRRLT LDKAHEIYGD PLPEIVQNRL DRELNSIINN GYAVMYIIAQ
KLVSKSLKDG YLVGSRGSVG SSLVATMSGI TEVNPLPPHY VCPNCKYSEF ITDGSYGCGV
DMPDKTCPHC GTLMRKDGFD IPFEVFLGFE GDKEPDIDLN FSGEYQPIAH KYTEELFGKG
HVFRAGTIGT LADKTAYGYV KKYFEERNLI VHKSEIKRLT VGCTGVKRTT GQHPGGIMVV
PKDKSIYDFT PIQHPADAED TDVITTHFDY HSISGRLLKL DILGHDDPTV IRMLEDLTGI
NAREIPLDDK KTMSLFTSVE ALGIDPEELN TPVGTLGLPE FGTKFVRQML IDTRPTTFAE
LVRISGLSHG TDVWLNNAQD IIREGIATLK EVISTRDDIM LYLISKGMDK KLSFKIMENV
RKGKGVTQEE IEEMRKHGVP NWFIESCQKI KYMFPKAHAV AYVIMAFRIA YFKVHYPEAF
YATYFTVRAD DFNLDIVLKG KDSIKNAIKE IEAKGNNASP KEKSLLTVLE VALEMYLRGF
KFINVDLYKS DAVKFLITEE GLLPPLNSLE GVGIQAAKTI AQERENGKFL SVEDFRNRTK
VSKTVIEILK QHGCLIDLPE SNQLSLF
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