Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_1578 |
Symbol | |
ID | 5876927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | + |
Start bp | 1598567 |
End bp | 1599277 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641541926 |
Product | pseudouridine synthase |
Protein accession | YP_001663201 |
Protein GI | 167040216 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGGT TGCAAAAATA CTTAGCAGAA TGTGGAATAG CCTCACGAAG AAAGTGCGAA GAGTATATTT TACAAGGCCG TGTAAAAGTA AATGGAAAAG TAGTAAAAGA GTTGGGAGTA AAAATCAATC CTGATGTTGA CATAATTGAA TTTGATGATA AAATTGTGAG AAGAGAAAAG AAAAAAGTTT ATATTATGTT AAATAAGCCA ACAGGATATA TTACTTCCGT AAAAGACCAG TTTGGCAGGC CTACAGTGAT GGACTTAGTT AAAGTTAAGG AAAGAATATA TCCTGTTGGC CGCTTAGATT ATGATACATC AGGGCTTCTG TTACTCACAA ATGATGGGGA GATAGCCAAT ATCTTAATGC ATCCTCGACA TGAAATTGTG AAGACGTATA TTGCAAAAAT CAAAGGAATT CCAACACAAG AAGAGTTGGA AAGGTTTAGA AATGGACTTT TGATAGGAGA TTATTTGACT TCGAAAGCAG AAATAGAGAT TTTAGCAGTT AAAAATGGGA CAAGTGTTGT AGAAATAAAA ATTCATGAAG GGAAAAATAG ACAAGTTAGA AGAATGTGTG AGGCTATTGG ACATCCTGTT ATTTCTCTTA CAAGAACTAA AATTGGTGAC TTGTCTTTAG AAGGGTTAAA ACCAGGAAAG TGGAGGTATT TGACACAAAA GGAAATAGAT TATTTAAAAA GCTTGAGGTG A
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Protein sequence | MERLQKYLAE CGIASRRKCE EYILQGRVKV NGKVVKELGV KINPDVDIIE FDDKIVRREK KKVYIMLNKP TGYITSVKDQ FGRPTVMDLV KVKERIYPVG RLDYDTSGLL LLTNDGEIAN ILMHPRHEIV KTYIAKIKGI PTQEELERFR NGLLIGDYLT SKAEIEILAV KNGTSVVEIK IHEGKNRQVR RMCEAIGHPV ISLTRTKIGD LSLEGLKPGK WRYLTQKEID YLKSLR
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