Gene Teth514_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTeth514_1541 
Symbol 
ID5876727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoanaerobacter sp. X514 
KingdomBacteria 
Replicon accessionNC_010320 
Strand
Start bp1564320 
End bp1565120 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content33% 
IMG OID641541889 
Producthemolysin A 
Protein accessionYP_001663164 
Protein GI167040179 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCAA AAAAAGAAAG ATTGGATGTT TTGCTTGTTC AAAAAGGTTT TTTCTCCTCA 
AGAGAAAAAG CAAAAGCTTC TATTATGGCA GGAGAAGTAT ATGTTGATGG CAAGAAAATT
GAAAAAGCTG GAGAGTTTGT CAACATAGAT TCTTCAATTG AAATAAAAAT TAATTCTTTA
CCTTATGTAA GTAGGGGTGG GCTAAAGTTA CAAAAAGCAA TAGAAACTTT TAATATTAAT
GTGACTGGCA AGATTGCGTT AGATATTGGA GCTTCTACAG GAGGTTTTAC TGATTGCCTT
TTAAAACATG GTGTTATAAA AGTATATGCT GTAGATGTAG GATACGGGCA ATTGGATTGG
AGTTTAAGAA ATGACCCTCG GGTCATAAAC ATGGAAAAAA CTAATATAAG ATTTTTAGAA
ACATTGCCTG AAACAGTGGA CATGGTGACA ATAGACGTTT CTTTTATTTC ACTTGAACTT
GTTATACCTT CTGCAGATAA ATTTTTAAAA CCAGAGGGAG ATTTGATAGC TTTAATAAAA
CCTCAATTTG AAGCAGGAAG AGAGAAAGTA GGTAAAAAAG GCGTGGTGAG AGACCCGGCT
GTTCATAGGG AAGTGATTGA AAAAATTGTG ACTTTGTTTC AAAAGTTTAA CTACGGTATA
ATAGGTATTA CCTATTCTCC TATAAAAGGG GCAGAAGGCA ATATAGAGTA TTTAATCTAT
AGCAAAAAGT GGATCGAAAA TCAACACAAT ATTGATATTA CAAAAATTGT AGAAGAGGCA
TTTAAAAATT TGAACAAATA A
 
Protein sequence
MASKKERLDV LLVQKGFFSS REKAKASIMA GEVYVDGKKI EKAGEFVNID SSIEIKINSL 
PYVSRGGLKL QKAIETFNIN VTGKIALDIG ASTGGFTDCL LKHGVIKVYA VDVGYGQLDW
SLRNDPRVIN MEKTNIRFLE TLPETVDMVT IDVSFISLEL VIPSADKFLK PEGDLIALIK
PQFEAGREKV GKKGVVRDPA VHREVIEKIV TLFQKFNYGI IGITYSPIKG AEGNIEYLIY
SKKWIENQHN IDITKIVEEA FKNLNK