Gene Teth514_1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTeth514_1504 
Symbol 
ID5876956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoanaerobacter sp. X514 
KingdomBacteria 
Replicon accessionNC_010320 
Strand
Start bp1535627 
End bp1537303 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content37% 
IMG OID641541852 
Producttype II secretion system protein E 
Protein accessionYP_001663127 
Protein GI167040142 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID[TIGR02533] general secretory pathway protein E
[TIGR02538] type IV-A pilus assembly ATPase PilB
[TIGR01420] pilus retraction protein PilT 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGA AAAAGCTAGG GGAGCTTTTA CTTGAGGTAG GGCTTATAAC AGAAGAACAA 
TTAAAGCACG CAATAGAAGT TCAAAACAAA ACAGGAGAAA AGTTAGGAAA AGTTCTTATT
AAATTGGGGT ATGTTACAGA AAGCCAAATA CTAGAGGCTT TAGAATTTCA ATTAGGTATT
CCACATGTAG ATTTGCAAAA ATACTATATT GATCCCGATG TAGCAAAATT AATTCCTGAA
GCCGTTGCTA AAAGACATAC TATTATTCCT ATAAAAAAAG ATGAAGATGG TATATTGGTA
GCAATGGCAG ACCCTCTGAA TATTTTTGCA CTAGATGATG TGAGAATCAT TACGAAACAA
AATGTAAAGC CTTTAATTGC TTCTGAAGGA AGCATCTTAA AAGCCATAGA TAGAATTTAC
GGAAGAGAAC AGGCAGAAAA AGCAGTACAG GATTTTAAAA AGGAGTTTCA AAGTGAAAGT
CAAGAAGAGC TGCCAGATGA GATTCTTGAA GAAGTACAAA ACGCGCCTGC TGTACGCTTT
GTAAATTCTA TAATTGAGCA GGCAATAAAA AATAGGGCTT CAGATATTCA CATTGAACCT
ACTGAAAAAG ACCTTAGAAT TCGATTTAGG ATAGATGGAC AATTAACAGA AGCTATGAGG
ACTATAAAAA GTACCCATGC CCCTGTTGTG ACAAGAGTAA AAATTATGGC TAATATGAAC
ATCGCTGAAA GAAGACTTCC TCAAGATGGC AGATTTGATT TTACTACAGG TGGTAAAAAT
ATTGACATAA GAGTTTCTTC GTTGCCCACT GTTTTTGGAG AGAAATTGGT ATTGAGGCTT
TTAGACAAGG AAAATTTTAT AATGACAAAG GAGCAATTAG GTTTTGAAGA AGAGGATCTG
GTGCTCTTTG ATAAACTTAT CAAAAGGCCT AATGGCATTG TGCTTTTGAC TGGTCCTACA
GGTAGTGGGA AAACCACCAC TCTTTATGCA ATGCTGAGAG AGCTTAACAA ACCCAATATT
AATATAATAA CTGTTGAGGA CCCTGTTGAG TATTCCCTTG AGGGAATAAA CCAGGTACAA
GTTAATGAAA AGGCAGGCCT TACCTTTGCG ACTGCTCTTA GGTCAATTTT GAGGCAAGAC
CCTGATATAA TTATGATTGG AGAAATTAGA GATACTGAAA CTGCTGAGAT AGCTATTCGC
TCTGCCATAA CAGGGCACTT AGTCCTTTCC ACTTTGCATA CAAATGATGC GGCGGGAGCG
GTGACTAGGC TTGTAGATAT GGGTATAGAG CCTTATCTTG TGTCTTCTTC TGTAGTAGGG
GTTATTGCTC AGAGATTGGC GAGAAAAATA TGTGATAACT GTAGAATTTC TTATAAAGCT
TCCAAAGGCG AAAAAGAGCT ATTGGGAATT TCAGAAAATG AAGACATTAC TTTATACAAG
GGGAGAGGGT GCCCTGTTTG TAATAAAACA GGCTATAGGG GAAGAATTCC TATATATGAG
ATAATGACTG TTACTTCTGA TATTAGAGAG CTTATAAATG CTAAGGTTTC CTCTGATGTT
ATTGGAGCTC AGGCTGTAAA AAATGGCATG AAAACTTTAC GAGAAAGTGC TAAAAGACTT
GTATTACAAG GAAAAACTAC AATTGATGAA ATGATAAGAC TAACTTACGA GGAATGA
 
Protein sequence
MAKKKLGELL LEVGLITEEQ LKHAIEVQNK TGEKLGKVLI KLGYVTESQI LEALEFQLGI 
PHVDLQKYYI DPDVAKLIPE AVAKRHTIIP IKKDEDGILV AMADPLNIFA LDDVRIITKQ
NVKPLIASEG SILKAIDRIY GREQAEKAVQ DFKKEFQSES QEELPDEILE EVQNAPAVRF
VNSIIEQAIK NRASDIHIEP TEKDLRIRFR IDGQLTEAMR TIKSTHAPVV TRVKIMANMN
IAERRLPQDG RFDFTTGGKN IDIRVSSLPT VFGEKLVLRL LDKENFIMTK EQLGFEEEDL
VLFDKLIKRP NGIVLLTGPT GSGKTTTLYA MLRELNKPNI NIITVEDPVE YSLEGINQVQ
VNEKAGLTFA TALRSILRQD PDIIMIGEIR DTETAEIAIR SAITGHLVLS TLHTNDAAGA
VTRLVDMGIE PYLVSSSVVG VIAQRLARKI CDNCRISYKA SKGEKELLGI SENEDITLYK
GRGCPVCNKT GYRGRIPIYE IMTVTSDIRE LINAKVSSDV IGAQAVKNGM KTLRESAKRL
VLQGKTTIDE MIRLTYEE