| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1427 |
|---|
| Symbol | |
|---|
| ID | 5877593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | + |
|---|
| Start bp | 1462118 |
|---|
| End bp | 1463389 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641541776 |
|---|
| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_001663052 |
|---|
| Protein GI | 167040067 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000127562 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTG AAGTAAAGAA GAAAAGATTT TTAAAAGGTG TTATCTCTGT CCCAGGAGAT
AAGTCAATAT CTCATAGAGC TGTAATGATT GGGTCAATTG CAGAAGGAAT TACAGAGATT
GAAAATTTTC TTTTAGGAGA AGATTGTATA TCTACTATTA ACTGTATGAA AAATTTGGGT
GTTGACATTG AATTAAAAGG CACAAATGTT AAAGTTCAAG GAAAAGGACT TTATCTAAAT
AAAAGTGAAA AAATTCTTGA TGTAGGAAAT TCGGGTACTA CTATTCGGCT TTTGATGGGT
ATTCTCGCTG GTCAAAAATT TGAGACAACG CTTACAGGCG ATGATTCTAT AAAGAGACGC
CCTATGGGAA GAGTGATAAC TCCTCTTAGT ATGATGGGAG CGAAAATAGA AGCAAGAGAA
GGAAATTTTG CACCTCTTAC GGTTTTTGGA AACAAACTTA AAGGCATATA TTACAAAATG
CCAATTGCCA GTGCACAGGT TAAGTCCAGT ATAATGTTGG CAAGCCTTTA CGCCGATGAT
AAAACGACTA TTGAAGAGCC CTACCCTTCA AGAAATCACA CGGAACTCAT GTTTAGTTCT
TTTGGTGCTA AAGTGGAGGT AAATGGCACA AAAATAACTT GTTACCCTGG CTACAAATTA
CAAGGGCAGA AAGTTATTGT ACCAGGGGAT ATATCGTCAG CAGCATATTT TATTGTTGCT
GCAACTCTCG TTCCAAATTC GGAGGTTACT ATAAAAAATG TAAATGTAAA TCCTACAAGA
ACCGGTATTA TTGATGTGAT AAAAGAGATG GGAGGAGACA TTGTCTTAAC AAATGAAAGA
ACTATAAACA ATGAAAAAGT AGCGGATATA ACAGTTAAGA CTTCAAGGCT AAAAGGAATT
GAAATTGGAG GAAGTCTTAT TCCAAGGCTT ATTGATGAAA TTCCAGTAAT AGCAGTTGCA
GCAGTCTTCG CAGAAGGGAA AACAGTGATA AAAGATGCCG AGGAGTTAAA AGTAAAAGAA
AGCAATAGAA TAAATACAAT CACTTCAGAA TTAAAGAAAA TGGGAGCTAA AATTTTTGAA
ACAGAAGATG GGATGATTAT AGAAGGCACG GGATTTTTGA AAGGGAATAC AGTGGAAAGT
TACAATGACC ACAGGATTGC CATGTCTTTA TGGGTTGCTG GACTTATGGC AGAAGGAGAA
ACTAAGATAA AAAATGCTGA ATGTGTAAAT ATTTCGTATC CGGATTTTTA TAAAACCTTT
GATATGCTTT AA
|
|---|
| Protein sequence | MDIEVKKKRF LKGVISVPGD KSISHRAVMI GSIAEGITEI ENFLLGEDCI STINCMKNLG
VDIELKGTNV KVQGKGLYLN KSEKILDVGN SGTTIRLLMG ILAGQKFETT LTGDDSIKRR
PMGRVITPLS MMGAKIEARE GNFAPLTVFG NKLKGIYYKM PIASAQVKSS IMLASLYADD
KTTIEEPYPS RNHTELMFSS FGAKVEVNGT KITCYPGYKL QGQKVIVPGD ISSAAYFIVA
ATLVPNSEVT IKNVNVNPTR TGIIDVIKEM GGDIVLTNER TINNEKVADI TVKTSRLKGI
EIGGSLIPRL IDEIPVIAVA AVFAEGKTVI KDAEELKVKE SNRINTITSE LKKMGAKIFE
TEDGMIIEGT GFLKGNTVES YNDHRIAMSL WVAGLMAEGE TKIKNAECVN ISYPDFYKTF
DML
|
|---|
| |