Gene Teth514_1354 details

Gene Information

• Locus tag: Teth514_1354
• Symbol: smpB
• ID: 5877665
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermoanaerobacter sp. X514
• Kingdom: Bacteria
• Replicon accession: NC_010320
• Strand: +
• Start bp: 1392216
• End bp: 1392686
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 641541703
• Product: SsrA-binding protein
• Protein accession: YP_001662980
• Protein GI: 167039995
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000258997
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCGAAGG AAGAAATTAA AATAATCGCT CAAAACAAAA AAGCTTACCA TGATTACTTC 
ATTGAAGAAA CTTATGAAGC AGGAATAGTG CTTAGTGGAA CTGAAGTTAA ATCTATTAGG 
ATGGGGAAAG TCAATTTAAA AGATAGCTTT GCAAGAGTTG AAAACAACGA AGTTTATCTT 
TATAATATGC ATATAAGTCC TTATGAAAAA GGCAATATAT TTAATAAAGA CCCCTTAAGG 
ACTAGAAAAT TACTTCTCAA TAGACATGAG ATTAATAAAC TAATTGGTTA TGTGACAAGG 
AAGGGTTACA CTTTAATTCC TACAAAGCTT TATTTAAAGC GAGGCCTTGT CAAAGTCGAA 
TTAGCTGTAG CGAGAGGTAA AAAACTCTAC GATAAGAGAG AAGATATTGC GAGAAGAGAT 
GCAAAAAGAG AATTAGAAAA ACACTTTAAA GAAAAACAAT TAGGCATATA A 

 

Protein sequence

MAKEEIKIIA QNKKAYHDYF IEETYEAGIV LSGTEVKSIR MGKVNLKDSF ARVENNEVYL 
YNMHISPYEK GNIFNKDPLR TRKLLLNRHE INKLIGYVTR KGYTLIPTKL YLKRGLVKVE 
LAVARGKKLY DKREDIARRD AKRELEKHFK EKQLGI