| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_1197 |
|---|
| Symbol | |
|---|
| ID | 5877681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoanaerobacter sp. X514 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010320 |
|---|
| Strand | + |
|---|
| Start bp | 1235360 |
|---|
| End bp | 1236724 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641541547 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_001662827 |
|---|
| Protein GI | 167039842 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
|---|
| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000142692 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTGCACA ACATAAAAGT AGGAGAAAAT TATGAGGTAT ATATTGACAA TATGGCTCAT
GAAGGGCAAG GAGTTGGAAG AATTGGAGGA GTTGCTACAT TTGTAGAAGG AGCATTGACA
GGAGAAAAGG TTGTTGCACA AATAGATAAA GTTTATAAAA ATTACGTTAT AAGTCATGTA
GTAGAAATAT TAGAAAAGTC TCATGATAGA GTAAAGCCTT TATGCCCTTA TGCAAATAAA
TGTGGTGGTT GCTCTTTCCA GCATCTAAGT TACGAAGGGC AGTTAAAATA CAAAACACAA
AAGGTAAAAG ACAATTTAGA AAGAATAGGT AAAGTGTATA CTAAAGTTCA TGAAATCATA
GGAATGAAAG AGCCACAAAG ATATAGAAAT AAGGCTCAGT TTCCTGTTGG AATGCTTGAT
GGTGAAGTAG TGACGGGCTT TTATGCACCT CGTTCTCACG ATATTGTACC TATAGAAAGC
TGTATGATAC AGGATGAGGT TAGTGATTAT ATCGCAAGGA CTATAAGAAA TTGGATTAAA
AAATATAACG TTTCTGTATA TGATGAAAAA GCAGGAAAGG GTTTGATAAG GCATATTGTT
ACAAGAGTTG GGTTTAAAAC AGGAGAAGTT ATGGTTATCC TTGTGGTTAA TGGAAAACAC
ATACCCTATA AAGAACAATT AATTGATGCT TTGAAAAAAG AGATAAATGG ACTTAAAAGT
GTAGTATTAA ATATCAACAC AAAAAGAACT AATGTGATTA TGGGGGAGGA TAATATAACT
ATTTATGGAA GCGATAATAT TATTGACTAT ATCAAGGACA TAAAATTCGA GATATCACCT
TTATCCTTTT TTCAAGTAAA TCCTGTTCAA ACAGAGGTTT TATACGGAAA GGCCCTTGAG
TATGCCGATT TAAAGGGAGA TGAGACCGTA ATAGATGTGT ATTGTGGGAT AGGTACCATA
TCTTTATTTG CAGCACAGAA GGCTTTTTTT GTCTATGGTA TAGAGGCTGT CCACCAAGCA
GTGGAAGATG CAAAGAGAAA TGCTTACATA AATGGCATTA AAAACGTGGA ATTTATTTCA
GGACAAGCGG AAAAAGTAAT GCCTGAGTTA GTTGATAAAG GAGTCAAAGC AGATGTAGTT
ATAATAGATC CTCCAAGGAA GGGTTGCGAT ATACCTGTTT TAGAAGCAAT TGTGAATATG
AATCCACAAA AAATTGTATA CGTCTCTTGT AATCCTTCTA CATTGGCACG AGATTTAAGA
TATCTTGATG ACAAAGGATA CAAAACCATG GAAGTGCAAC CTGTTGATAT GTTTCCTTAT
ACGCATCACG TTGAAAGTGT TTGCTTGATT ACTAATAAAA GTTAA
|
|---|
| Protein sequence | MLHNIKVGEN YEVYIDNMAH EGQGVGRIGG VATFVEGALT GEKVVAQIDK VYKNYVISHV
VEILEKSHDR VKPLCPYANK CGGCSFQHLS YEGQLKYKTQ KVKDNLERIG KVYTKVHEII
GMKEPQRYRN KAQFPVGMLD GEVVTGFYAP RSHDIVPIES CMIQDEVSDY IARTIRNWIK
KYNVSVYDEK AGKGLIRHIV TRVGFKTGEV MVILVVNGKH IPYKEQLIDA LKKEINGLKS
VVLNINTKRT NVIMGEDNIT IYGSDNIIDY IKDIKFEISP LSFFQVNPVQ TEVLYGKALE
YADLKGDETV IDVYCGIGTI SLFAAQKAFF VYGIEAVHQA VEDAKRNAYI NGIKNVEFIS
GQAEKVMPEL VDKGVKADVV IIDPPRKGCD IPVLEAIVNM NPQKIVYVSC NPSTLARDLR
YLDDKGYKTM EVQPVDMFPY THHVESVCLI TNKS
|
|---|
| |