Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_1187 |
Symbol | |
ID | 5876820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | + |
Start bp | 1223420 |
End bp | 1225144 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641541537 |
Product | alpha amylase, catalytic region |
Protein accession | YP_001662817 |
Protein GI | 167039832 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.649745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAAAAG AAGCTATATT TCATAAAAGC GATATGCCTT ACGCATATCC ACTGAATGAA AATCAATTAA AGATAGTACT AAGGACGGCT GTATTTGATG TAGATAGGGT GTATGTTTTA TACAAAGACA GATACGATTG GCTGGGAAAA TTCAAAATAA AACCAATGGT ATTAACTCAT ACCAACGAGT TATTTGATTA TTATGAGACT ACTTTAGAGC TTAATAAAAA ATTTGTGTAT TTTTTCTATT TGGTATCTGA TGGGGGCGAG AAGTTATATT ATACAGAAGC AGGATTTTAC AAAAAAAGGC CAGAAAATCA TTTTTGGGGA TTTTTCCATT ACCCGTATAT AGGAGAAAAG GATGTCTTTT TTGCTCCAGA GTGGACAAGC GATTGCATAG TGTATCAGAT ATTTCCTGAA AGGTTTAATA ACGGTGACAA ATCAAATGAC CCTGAAAGTG TAAAGCCTTG GGGTGAAAAA CCTACTGCAG ATTCTTTCTT TGGAGGAGAT TTGCAAGGAA TAATAGATAA AATAGATTAT TTAAAGGATT TGGGTATAAA TGCTATTTAT TTAACCCCCA TATTTTTATC GCCTTCTACT CACAAATATG ATACCACTGA TTATTATACA ATTGACCCCC ACTTTGGTGA TACGCAAAAA GCGAGAGAAC TTGTGCAAAA ATGTCATGAC AATGGCATAA AAGTTATATT TGATGCCGTT TTTAATCACT GTGGATATGA TTTTTTTGCA TTTCAGGATG TTATTAAAAA TGGTAAAAAA TCAAAATACT GGAATTGGTT TAATATATAC GAATGTCCAC TTAAAACTCA TCCAAAACCA TCATATGAAG CTTTTGCAGA TACTGTATGG AGAATGCCAA AACTTATGAC AAAAAATCCA GAAGTACAGA AGTATTTATT GGAAGTAGCG GAATATTGGA TTAAAGAAGT GGACATAGAC GGCTGGAGGC TGGATGTTGC TAATGAGATA GACCACCATT TTTGGAGAAA GTTTAGAGAA GTTGTAAAGG CAGCTAAACC GGAGGCCATA ATTGTAGGAG AGGTTTGGCA TGATGCTTCT CCTTGGCTTA GAGGGGATCA GTTTGACAGT GTAATGAACT ATCCTTTTAG AAATGCGGTT GTAGACTTTT TTGCAGAAAG GAAAATAAGT GCTTCTCGCT TTAATACAAT GATTACAGAG CAACTTATGA GGCATATGGA TAGTGTAAAT AGGGTTATGT TTAATTTAAT AGGAAGTCAT GATACTGAAA GGTTTTTGAC TTTAGCTAAT GGCATGGTTG CGAGAATGAA GTTAGCGTTG GTGTTTCAAT TTACCTTTGT TGGAATTCCA TATATTTATT ATGGAGACGA GGTAGGAATG GTAGGGGGGT ATGACCCTGA TTGTAGAAGA TGCATGATAT GGGAGGAGGA AAAGCAAAAT AAAAGTATTT TTAATTTCTA TAAAAAGCTG ATTTCTATAA GGAGAGAAAA TGAGGAGCTC AAATACGGAA GTTTCTGTAC TTTATACGCT ATAGGAAGGG TATTTGCTTT TAAGAGGGAA TACAAAGGTA AATCAATAAT TGTTGTACTA AATAACAGTA GCAAGCAGGA AGTGATATTT TTGAATGAAG TAGAAGGAAA AGAAGATATT TTAAAGATGA AGGAATTAAA AAGGAGTGGA AATCTCCTTT ACTTGCAACC TAACTCTGCC TATATTTTAA AGTAA
|
Protein sequence | MIKEAIFHKS DMPYAYPLNE NQLKIVLRTA VFDVDRVYVL YKDRYDWLGK FKIKPMVLTH TNELFDYYET TLELNKKFVY FFYLVSDGGE KLYYTEAGFY KKRPENHFWG FFHYPYIGEK DVFFAPEWTS DCIVYQIFPE RFNNGDKSND PESVKPWGEK PTADSFFGGD LQGIIDKIDY LKDLGINAIY LTPIFLSPST HKYDTTDYYT IDPHFGDTQK ARELVQKCHD NGIKVIFDAV FNHCGYDFFA FQDVIKNGKK SKYWNWFNIY ECPLKTHPKP SYEAFADTVW RMPKLMTKNP EVQKYLLEVA EYWIKEVDID GWRLDVANEI DHHFWRKFRE VVKAAKPEAI IVGEVWHDAS PWLRGDQFDS VMNYPFRNAV VDFFAERKIS ASRFNTMITE QLMRHMDSVN RVMFNLIGSH DTERFLTLAN GMVARMKLAL VFQFTFVGIP YIYYGDEVGM VGGYDPDCRR CMIWEEEKQN KSIFNFYKKL ISIRRENEEL KYGSFCTLYA IGRVFAFKRE YKGKSIIVVL NNSSKQEVIF LNEVEGKEDI LKMKELKRSG NLLYLQPNSA YILK
|
| |