Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_0868 |
Symbol | rplD |
ID | 5876288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | + |
Start bp | 905885 |
End bp | 906505 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641541213 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_001662506 |
Protein GI | 167039521 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000685593 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAAGG TAGCAGTTTA CAACGTAAAA GGGGAACAGG TAGGAGAAAT AGAACTAAAG GATTCAGTTT TTGGCGTGCC AGTAAATGTT CCTGTTATGC ATGAAGCTGT GTTAAATTAT TTGGCAAATC AAAGGCAAGG TACCCATTCG ACAAAAACCC GCGGTGAAGT TCGTGGCGGC GGAAGAAAGC CTTGGAGACA AAAGGGAACA GGAAGAGCAC GTCAAGGAAG CATAAGAGCT CCTCAATGGA TTAAAGGAGG CATTGTCTTT GGACCAAAAC CAAGAGATTA CAGCTATAAA TTGCCTAAAA AAGTAAAAAG ATTAGCTTTA AAATCTGCTC TTTCATCTAA AGTTAGAGAT AACGAGATAA TTGTATTAGA TGAATTCAAA TTAGATCAGC CAAAGACTAA AAAAGTTGTT GAGCTTCTTA AGAATTTTAA TGTTGATAGT GCGTTAATAG TGGTACCTGA AGGGGAAAAG AACGTAGAAC TTTCAGCAAG AAATATACCA GGTGTTAAAA CTTTATATGC TAATTATTTG AATACTTATG ATATTTTAAA ATACGACAAG TTTATCATAA CTAAGGATGC CGTGGGCATA GTCGAGGAGG TGTACGCCTA A
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Protein sequence | MPKVAVYNVK GEQVGEIELK DSVFGVPVNV PVMHEAVLNY LANQRQGTHS TKTRGEVRGG GRKPWRQKGT GRARQGSIRA PQWIKGGIVF GPKPRDYSYK LPKKVKRLAL KSALSSKVRD NEIIVLDEFK LDQPKTKKVV ELLKNFNVDS ALIVVPEGEK NVELSARNIP GVKTLYANYL NTYDILKYDK FIITKDAVGI VEEVYA
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