Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_0867 |
Symbol | rplC |
ID | 5876287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | + |
Start bp | 905235 |
End bp | 905867 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641541212 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_001662505 |
Protein GI | 167039520 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000729631 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAG GTATTTTAGG TAGAAAGCAT GGGATGACAC AAATATTTGA TGAAAAAGGC GAAGTCATTC CAGTAACAGT GATTGAAGCT GGTCCTTGTG TTGTTGTTCA GAAAAAAACA GTGGAGACTG ATGGATACAA TGCTATTCAA GTTGGTTTTG GAGATGTTAA AGAGAAAAGA CTTACAAAAC CTTTAATAGG GCATTTTAAA AAAGCAGGAG TGCCTTTTAA AAGATATTTA AGAGAGTTTA GGTTAGATGA CATAAGTGGA TATGAAGTAG GTAGCGAAAT AAAGGTAGAT ATTTTTAAAC CAGGAGATAG AGTAAATGTA ACAGGTATTT CAAAAGGTAA AGGCTTTGCA GGTGTTGTAA AGAGATATGG CGCTAATAGA GGACCTATGT CTCACGGTTC CAAATATCAT AGAAGAGTAG GTTCGATGAG TGCTACCACA GACCCAGGAA GAACTTTTAA AGGTAAAATC ATGCCTGGGC ATATGGGACA TGAAAGAGTG ACTATACAAA ACCTCGAAGT TGTAAAAGTT GATCCTGAAT TAAATTTATT GTTAGTAAAA GGATCAGTGC CAGGACCTAA AGGTTCCTTG CTCATTATAA AAGATTCCGT GAAGAGCAAG TGA
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Protein sequence | MKKGILGRKH GMTQIFDEKG EVIPVTVIEA GPCVVVQKKT VETDGYNAIQ VGFGDVKEKR LTKPLIGHFK KAGVPFKRYL REFRLDDISG YEVGSEIKVD IFKPGDRVNV TGISKGKGFA GVVKRYGANR GPMSHGSKYH RRVGSMSATT DPGRTFKGKI MPGHMGHERV TIQNLEVVKV DPELNLLLVK GSVPGPKGSL LIIKDSVKSK
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