| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_0859 |
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| Symbol | rpoB |
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| ID | 5877941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoanaerobacter sp. X514 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010320 |
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| Strand | + |
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| Start bp | 892673 |
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| End bp | 896389 |
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| Gene Length | 3717 bp |
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| Protein Length | 1238 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641541204 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_001662497 |
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| Protein GI | 167039512 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.111826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTACGTC CTGTACAAGT GGGCAACAAG ACAAGAATGA GCTTTGCCAA GATTGATGAA
GTTCTACAAA TGCCCGACCT TATTGAAGTT CAAAAGAAGT CCTACAAATG GTTTTTAGAG
GAGGGATTGA GAGAAGTTTT TAGAGAAATT TCCCCAATAG AGAGCTTTAC GGGAAATTTG
GCTTTAGAAT TTGTGGATTA TAGATTAGAA AATAACCCTA AGTATTCAGT AGAAGAATGT
AAAGACAGAG ATACTACATA TGCTGTGCCG ATGAAAGTTA AAGTACGCCT TACCAATAGG
GAAACAGGGG AAATTAAGGA ATCCGAGGTA TTTATGGGAG ATTTCCCTTT AATGACAGAA
AAGGGTACTT TTATTATAAA TGGCGCAGAA CGTGTAATTG TAAGCCAATT GGTGAGGTCT
CCAGGAGTCT ATTATGAACA GCAATTTGAT AAATTTGGGA AAAAATTGAT TTCTGCAACT
GTAATTCCAA ATAGAGGGGC TTGGCTAGAA TATGAAGAAG ATTCAAATGA TATAGTATAT
GTTAGAATCG ACAGGACAAG AAAAGTTCCA ATTACTGTAT TATTAAGGGC TTTGGGGTAT
AGTACTGATA TTCAAATTCT TGACCTTTTA GGGGAAGAGG AAAAACTAAA AGCTACTTTA
GATAAGGATA CTACAAAATC TGAAGAAGAG GCTTTAATAG AAATTTATAA GAGATTAAGA
CCAGGAGAGC CGCCTACTGT CGAGAGTGCT AAAAGCCTTT TGTATGCACT ATTTTTTGAT
GCAAAAAGGT ATGATTTAGC AAAAGTTGGG CGCTATAAAT TTAATAAAAA ACTTGCATTA
AAAGCGAGAA TTGCAAACTT AAAAAGTGCA AAAAAGATTG TCAACCCTGT TACAGGTGAG
ATATTAGTAG AAGAAGGAGA GAAAATTTCA AAAGAAAAGG CAGAAGAAAT TCAAAATTGC
GGCATAAATG TAGTAGAAGT GTTAGTAGAG GGTAAAGTAG TAAAAGTAAT AGGCAATAAT
ACGGTGGATA TAAATAAATA TCCAATGCCT TATGATGTAT CTAGCTTAAA TATAAAAGAA
GCAGTAAATT TAAGTATATT AAAAGAAATA CTTGACAATT TCTCTGATGA AGAGGCGGTA
ATAAACGAAA TAAAAAATAG AATGGATGAA CTTGTTCCTA AGCACATTAC TAAAGATGAC
ATTATAGCCA CTATAAGTTA CCAATTAAAT TTAACTCATG GAATAGGTTC AATAGATGAT
ATAGATCATT TAGGAAATAG GAGACTGCGG TCTGTAGGGG AATTATTGCA AAACCAATTT
AGAATTGGAC TTGCGAGATT AGAAAGAGTA GTCAAAGAAA GAATGACAAT CCAAGATGTG
AATGAAATTA CTCCTCAAAA CCTTATAAAC ATTCGCCCAG TTGTAGCAGC CATTAGAGAG
TTTTTTGGAA GCTCCCAGCT TTCTCAATTT ATGGACCAAA CTAACCCTTT GGCAGAACTT
ACTCATAAGA GAAGAGTAAG TGCTTTAGGT CCTGGAGGAC TTAGTAGAGA AAGAGCGGGT
TTTGAAGTAA GAGACGTTCA TTATTCTCAC TATGGAAGGA TATGTCCAAT TGAGACTCCT
GAAGGACCTA ATATCGGTTT GATTGGATCT TTGACTACCT ATGCTCGTGT AAATGAATAT
GGATTTATTG AAGCTCCATA TAGGAGAGTA GATAAAACTA CTGGTACAGT TACAGATGAA
ATTGTATATA TGACTGCAGA TGAAGAAGAT GAATATATTA TAGCTCAAGC TAACGAACCA
TTAGATGAAA ACAACAGGTT TATTAATGAG AAAGTGGTAT GTAGATTAAA AGAAGAGATA
ATAGCTGTAC CTCCAACAGA AGTGGACTTC ATGGACGTTT CACCAAAACA GATAGTGTCT
GTTGCTACTT CTATGATACC TTTCTTGGAA AATGATGATG CGAATAGAGC CTTGATGGGG
TCTAACATGC AGAGGCAAGC AGTACCCCTT ATAAAACCTG AAGCACCAAT AATTGGAACG
GGTATAGAAT ATAAGGCAGC TGTTGATTCT GGTGTAGTAG TATTAGCGAA AAACGATGGA
GTAGTGGAAA AAGTCGCTGC TGATAAAGTT GTAATTAGAA CAAAGGACGG TAGAAGGGAT
GAGTATAATT TACTTAAATT TAAGAGGTCA AACCAGGGAA CTTGTATAAA CCAAAGGCCT
ATTGTAAATG AAGGAGATGA AGTGAAAAAA GGGCAAGTTA TATGCGATGG ACCTTCTACT
GACCACGGTG AACTTGCACT TGGGAAAAAT GTCTTAGTAG GATTTATGCT TTGGGAAGGT
TACAACTATG AAGATGCTAT TTTGATAAGT GAAGAATTGG TTAGAGATGA TTCTTTAACT
TCTATTCACA TTGAGGAGTA TGATGCAGAA GCAAGAGATA CGAAATTAGG TCCAGAAGAG
ATAACGAGAG AAATACCGAA TGTAGGCGAA GATGCTTTAA AAGATTTAGA CGAGAGAGGA
ATAATACGTA TAGGTGCAGA AGTTACCGCT GGTGACATAT TGGTAGGTAA AGTTACTCCA
AAAGGTGAGA CTGAACTTAC AGCTGAGGAA AGACTTTTAA GAGCTATTTT TGGAGAAAAG
GCAAGAGAAG TAAGAGATAC TTCTTTGCGT GTTCCTCACG GTGAGTCAGG TATAGTAGTA
GATGTTAAAG TTTATTCCAG AGAAAATGGT GATGAATTGC CACCAGGAGT CAACCAGATG
GTAAGAGTAT TTGTTGCTCA AAAGAGGAAA ATTTCTGTTG GAGACAAAAT GGCAGGGCGC
CACGGTAACA AGGGTGTTAT TTCAAGGATA CTTCCAGTAG AAGATATGCC ATTTTTGCCA
GACGGTACCC CTTTGCAGAT ATGTTTAAAC CCATTAGGTG TTCCATCCCG TATGAACATT
GGTCAGGTTT TAGAAGTTCA CTTGGGTCTT GTTGCAAAAG CATTGGGATG GCAGATTGCT
ACACCTGTTT TTGATGGAGC AACGGAAGAA GACATACAAG AGCTTTTAGC TAAATCGGGT
TTTTCTCCAG ATGGCAAGGT GCAATTGTAC GATGGAAGAA CAGGTGAGCC TTTTGATAAT
AAAGTTACAG TAGGTTATAT GTACATGCTA AAACTTCACC ATCTTGTTGA CGATAAGATG
CATGCAAGGT CTACTGGACC CTATTCTTTG GTTACTCAGC AACCTTTGGG TGGAAAAGCT
CAGTTTGGTG GACAGAGATT TGGTGAGATG GAAGTATGGG CATTAGAGGC ATATGGTGCA
GCTCATACTT TACAAGAGAT TTTAACGGTA AAATCTGACG ATGTATCAGG TCGTGTAAAA
ACCTATGAAG CTATTGTCAA GGGTGAAAAC ATACCAGAAC CAGGTATTCC TGAATCCTTT
AAGGTATTGG TTAAGGAACT TCAAAGCTTA GCATTAGATG TCAAAGTTAT CACAGAAGAT
AATCAAGAAA TTCCATTAAA AGAATTTGAA GATGATGACG ATTCTGATGT GCCAGATGCT
ACTCTTAATA TCAATATAGA AGGCCGCGAA GATACGCCGC CAGAAGAAGT GTATGAAGAA
GGCTACGAAG AAGGCTTTGA AGAAGAGAGT GAAGAATTGC CAGAGGATAT TGATTTTGAG
CCAGATAGTT TTGATATAGA AAATGATGAT TTAGATTTAG AAGATTTTGA TATTTAA
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| Protein sequence | MVRPVQVGNK TRMSFAKIDE VLQMPDLIEV QKKSYKWFLE EGLREVFREI SPIESFTGNL
ALEFVDYRLE NNPKYSVEEC KDRDTTYAVP MKVKVRLTNR ETGEIKESEV FMGDFPLMTE
KGTFIINGAE RVIVSQLVRS PGVYYEQQFD KFGKKLISAT VIPNRGAWLE YEEDSNDIVY
VRIDRTRKVP ITVLLRALGY STDIQILDLL GEEEKLKATL DKDTTKSEEE ALIEIYKRLR
PGEPPTVESA KSLLYALFFD AKRYDLAKVG RYKFNKKLAL KARIANLKSA KKIVNPVTGE
ILVEEGEKIS KEKAEEIQNC GINVVEVLVE GKVVKVIGNN TVDINKYPMP YDVSSLNIKE
AVNLSILKEI LDNFSDEEAV INEIKNRMDE LVPKHITKDD IIATISYQLN LTHGIGSIDD
IDHLGNRRLR SVGELLQNQF RIGLARLERV VKERMTIQDV NEITPQNLIN IRPVVAAIRE
FFGSSQLSQF MDQTNPLAEL THKRRVSALG PGGLSRERAG FEVRDVHYSH YGRICPIETP
EGPNIGLIGS LTTYARVNEY GFIEAPYRRV DKTTGTVTDE IVYMTADEED EYIIAQANEP
LDENNRFINE KVVCRLKEEI IAVPPTEVDF MDVSPKQIVS VATSMIPFLE NDDANRALMG
SNMQRQAVPL IKPEAPIIGT GIEYKAAVDS GVVVLAKNDG VVEKVAADKV VIRTKDGRRD
EYNLLKFKRS NQGTCINQRP IVNEGDEVKK GQVICDGPST DHGELALGKN VLVGFMLWEG
YNYEDAILIS EELVRDDSLT SIHIEEYDAE ARDTKLGPEE ITREIPNVGE DALKDLDERG
IIRIGAEVTA GDILVGKVTP KGETELTAEE RLLRAIFGEK AREVRDTSLR VPHGESGIVV
DVKVYSRENG DELPPGVNQM VRVFVAQKRK ISVGDKMAGR HGNKGVISRI LPVEDMPFLP
DGTPLQICLN PLGVPSRMNI GQVLEVHLGL VAKALGWQIA TPVFDGATEE DIQELLAKSG
FSPDGKVQLY DGRTGEPFDN KVTVGYMYML KLHHLVDDKM HARSTGPYSL VTQQPLGGKA
QFGGQRFGEM EVWALEAYGA AHTLQEILTV KSDDVSGRVK TYEAIVKGEN IPEPGIPESF
KVLVKELQSL ALDVKVITED NQEIPLKEFE DDDDSDVPDA TLNINIEGRE DTPPEEVYEE
GYEEGFEEES EELPEDIDFE PDSFDIENDD LDLEDFDI
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