| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_0839 |
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| Symbol | ispD |
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| ID | 5876944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoanaerobacter sp. X514 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010320 |
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| Strand | + |
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| Start bp | 876734 |
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| End bp | 877417 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641541184 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001662478 |
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| Protein GI | 167039493 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00179079 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGTAA GTGCGGTAAT AGTGGCGGCA GGTAAGGGCA TTAGAATGGG TCACACAGTA
AATAAAGTAT ACCTTCCTAT AGCAGGTAAA CCAGTTTTGT ATTATTCTCT CAAAGCCTTT
GATGAAATTG ATTGGATTAA GGAAATTGTT GTTGTTGTAT CAAAGGAAGA AATGGAATAT
TGCCAAGAAA ATGTAGTAAA AAAGTATTTT TTCAAAAAAC CAATTAAATT AGTAGAAGGA
GGTAGTGAAA GGCAGTATTC TGTTTATAAT GGAATTATAA ATACAGAGGG AGATTGCGAA
ATTATAGCAA TTCATGATGG AGCAAGGCCT TTAATTGAGA AAGAAATAGT TATAAAAGCT
TTAAAAGAAG CTTATTTGCA TAAAGCAGTA GCATTGGGAG TGCCTGTCAA AGACACTATA
AAAGTAGTTG ATGGGAAAAA TTTTATTTTA AATACCCCTG ATAGAAAATA TTTATGGGCA
ATTCAAACCC CTCAGGTATT TGAAAGGAAT TTGATTATTA AAGCTCATCA AAGGGCACTG
GAGGATGGTT TTTTAGGGAC AGATGACACA GTATTAGTGG AGAGATTGGG TTATAAAGTG
AAAGTAGTTG AAGGAGACTA TAGAAATATA AAGATTACTA CGCCAGAGGA TTTGATTGTG
GCAGAAGCTT TTTTAAAAAA ATAA
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| Protein sequence | MNVSAVIVAA GKGIRMGHTV NKVYLPIAGK PVLYYSLKAF DEIDWIKEIV VVVSKEEMEY
CQENVVKKYF FKKPIKLVEG GSERQYSVYN GIINTEGDCE IIAIHDGARP LIEKEIVIKA
LKEAYLHKAV ALGVPVKDTI KVVDGKNFIL NTPDRKYLWA IQTPQVFERN LIIKAHQRAL
EDGFLGTDDT VLVERLGYKV KVVEGDYRNI KITTPEDLIV AEAFLKK
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