| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_0593 |
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| Symbol | |
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| ID | 5876334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoanaerobacter sp. X514 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010320 |
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| Strand | + |
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| Start bp | 614999 |
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| End bp | 618496 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641540939 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_001662237 |
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| Protein GI | 167039252 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACTC GCCAAATAGA AGAATTAAAA GAGATTAAAA CAATAGAAGA ATTTCTTCAA
CAGAGGAAGG GACCTGTTTT GGCTTATGGG CTTACAGATT CTCAAAAAGC CCATATTGCC
CATTATATAA TGACTAAGTT TAACAAAAAG GTGTTAGTTA TTGCTCCTGA TGAGGTGGAA
GCAAGAAAAA TATACGAAGA TTTGTATTCT TTTAATTTTG GCAATGCTTC TTTATTTCCT
AAAAGAGAAG CCTTGTTTTA TAAAATAGAT GCTGCGAGTC AAGAAGTGGT GTCTCAGAGA
TTGCAGGTAA TTAAAAAATT GTCAGAAGAA AGTCCCCATG CTGTAGTTAC TTCTATAGAT
GCAGCAGTAG GCAAGCTCAT ACCTATGGAT TTGTTTAAAA AGTATCAGTT TGTTTTTAAA
TTAGGTGATA CTGTAAATTT AGAAGAAGTT ATAAAAAGTT TGGTGACCAT GGGGTATGAA
AGGGTTCAAA TAGTGGAAGG AAAAGGGCAA TTTAGTGTGA GGGGAGGAAT AATCGATGTT
TTTTCTCCTA CGGAAGAATA TCCTTATAGG ATTGAACTTT TTGACGATGA AATAGATTCC
ATAAGGACTT TTGATGTGAT TACCCAAAGG TCTTTAGAAA ATATTGATAA AATAAATATT
TTTCCAGCTA CAGAGTTTAT CGCAGAGGCA GAGCACATCA AAAAGGGGAT TTCGGCAGTT
TCGAACTATT TAAATTCCTA TTTGTCAAAA ATAAAAAAAC CGAAAAGTGG TATTGCAGAA
AAATTACAGC AAAAATTTGA AGAAATTATG GAGGAGATTA CGGAATCTAA AAGGGTAGAA
AATATTTATG AGCTTATAGA TTATTTTTAT GATGACGTTT ATTCTATTGT TGACTATATG
GGAGAAGATG CAGTTATTAT TTTAGATGAA AGCAGTCGCA TTAAACAAAG GGTAAATAAC
CTTCAAATGG AATTTAATGA AAATTTCAAG GCTTTGTTAG AAAAAGGAGA GGTTTTGCCA
GAGCAAAGTA AGCTTTTTTT TGATTATGAG GAAATATTAA AAAGAGTGAA AAATAATTTT
TTACTCATAA TGAATACTTT AGCAAAGCCA GGCAATGAGT TACAACCTCA AACGATTGTT
AATTTTGTAT CAAGGTCTAT GCATCATTTT CACGGCAATA TGGATATTTT AGTAGATGAT
TTGAAGTATT ACAAAAACGC AGGATATAAA GTGTTGCTTT TAAGTGGGAA TCAAGAAAGA
GCAAGAATTT TAAAAGATAC TCTTGACAGT TTTAATATTG ATACTGTAGT GATTAAAGAC
AGTGAATACG ATATACAAAA AGGGCAAGTG GTCATATATG CTGCCTCTGT TAGCAAGGGA
TTTGAGTATG TGGATGCAAA ATTTGCTGTT ATAAGCGATG GAGAAATTTT TGGTCAGACT
AAAAGGAGAA AAAGAACTGT AAAAATTAAA AATGCTGACA AGATAAAGAG CTTTACTGAA
TTAGAAATAG GGTCATATGT TGTGCATGTA AATTATGGCA TAGGAAAGTA TGAAGGCATA
GAAAAGATAA AAGTAGATGG AATTGTAAGG GATTATTTAA AAATAATTTA TGCAGGGGGA
GATACCCTTT TTGTACCAGT AGAACAATTA GACCTTGTGC AAAAATATGT GGGTCCTACA
GACAATCCTC CTAAATTAAA TAAATTAGGG GGTAGTGAAT GGCTTAAAGC AAAAAGAAAA
GCAAAAAAAG CAGTGGAAGA CCTTGCTAAG GATTTGATAC AACTTTACGC CAAAAGGCAG
ATGGTGAAAG GACATGCTTT TTCTCCTGAT ACTCCATGGC AAAAGGAGTT TGAAGAGCAA
TTTCCCTATG AAGAGACAGA AGACCAGTTA AGGTGTATAA AAGAAATTAA AGAGGATATG
GAAAAAGACA GGCCAATGGA TAGACTTCTT TGTGGAGATG TGGGATATGG TAAAACAGAA
GTGGCTTTAA GGGCTGCCTT TAAAGCGGTG GCTGATGGGA AACAGGTGGC TTTTTTGTGT
CCTACTACTA TACTTGCTTA TCAACATTAT GCTAATTTTA TTGAAAGGTT TAAAGAATTT
CCTGTAAAGA TAGAGATGCT CAGCCGTTTT AGAACTCCTA AAGAACAGAG TAAGATAATT
AAAGAGTTAG CGGAAGGAAA TATAGATATT ATAGTAGGTA CTCATAGGCT TTTACAAAAT
GATATAAAGT TCAAAGATTT AGGACTTTTA ATTATAGACG AAGAACAGAG GTTTGGAGTT
GTTCATAAAG AAAAAATAAA AAAACTTAAG GAAAATATAG ACGTTTTGAC ATTATCAGCA
ACTCCTATTC CCAGGACTTT ACACATGTCC TTGATTGGTA TAAGGGATAT GAGTGTATTG
GAGAATCCTC CTGAAGACAG ATTTCCAGTA GAAACCTATG TAGTGGAATT TAATGAAGAA
TTAATAAAAG ATGCTATTTT AAGGGAAATT GCAAGAGGGG GACAAGTCTA TTTTGTTTAC
AATAGGGTAA ATGGCATAGA AAAGATGGCT TCTTTTGTAA AAGATTTAGT TCCTGGTTGT
AGAGTAGCTG TGGCTCATGG GCAAATGGAA GAAAGTCAAT TAGAAAAAGT GATGATTGAC
TTTCTAAATG GGGAATACGA TGTTTTAGTA AGTACTACAA TAATTGAGAC AGGGCTTGAT
ATACCAAATG TAAATACTAT TATAGTTTAT GATGCCGATA AGTTAGGGCT TTCCCAATTG
TATCAATTAA GAGGAAGAGT AGGTAGGTCA AATAGACTTG CTTATGCCTA TTTTACCTAT
AGAAAGGATA AAGTTTTAAG TGAAGTGGCG GAAAAAAGGT TGGAGGCGAT AAAAGAATTT
ACTGAATTTG GTTCTGGATT TAAAATTGCC ATGAGGGATT TGGAGATAAG AGGTGCAGGC
AATCTCCTAG GAGCAGAACA ACATGGCCAT ATTGATGCTA TTGGTTATGA CTTGTATTTA
AAACTTTTAG AGGAGGCTAT ACGGAATTTA AAGGGAGAAG CTCCCAAAGA GGAGATTACT
ACCACAATAG ACATAAAGGT CAATGCTTAT ATTGATTCTT CCTATATTGA AGACGAAAAT
TTAAGATTGG AGATGTACAA GAAAATAGCC TCTATAAAAT CTAGAGAAGA TATGATAGAG
ATTTCAGAAG AGCTTGTAGA TAGGTTTGGC GATTATCCAA AGCCTGTAGA GGCACTATTG
GAAATTGCCT ATTTAAAGGC TATTGCCTCT CAAGTCAATA TTACCGAAAT AACTGAAAAA
GGGAATTCTG TTATTTTAAA GTTTAATGAT ATGAATTTGG TAAATATGGA GGTTATAGAG
AAAGTAATAA AGGAGTATGG AGGGAATTTA GTATTTTCAA GTCAAGTACA GCCATACCTC
ACTTATAAAT TCAATAAAAA AGAGACTCTG CAAAAAGAAC TTATTGAATT GGTAGAAAAA
ATAAAAAGTT TGCAGTGA
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| Protein sequence | MFTRQIEELK EIKTIEEFLQ QRKGPVLAYG LTDSQKAHIA HYIMTKFNKK VLVIAPDEVE
ARKIYEDLYS FNFGNASLFP KREALFYKID AASQEVVSQR LQVIKKLSEE SPHAVVTSID
AAVGKLIPMD LFKKYQFVFK LGDTVNLEEV IKSLVTMGYE RVQIVEGKGQ FSVRGGIIDV
FSPTEEYPYR IELFDDEIDS IRTFDVITQR SLENIDKINI FPATEFIAEA EHIKKGISAV
SNYLNSYLSK IKKPKSGIAE KLQQKFEEIM EEITESKRVE NIYELIDYFY DDVYSIVDYM
GEDAVIILDE SSRIKQRVNN LQMEFNENFK ALLEKGEVLP EQSKLFFDYE EILKRVKNNF
LLIMNTLAKP GNELQPQTIV NFVSRSMHHF HGNMDILVDD LKYYKNAGYK VLLLSGNQER
ARILKDTLDS FNIDTVVIKD SEYDIQKGQV VIYAASVSKG FEYVDAKFAV ISDGEIFGQT
KRRKRTVKIK NADKIKSFTE LEIGSYVVHV NYGIGKYEGI EKIKVDGIVR DYLKIIYAGG
DTLFVPVEQL DLVQKYVGPT DNPPKLNKLG GSEWLKAKRK AKKAVEDLAK DLIQLYAKRQ
MVKGHAFSPD TPWQKEFEEQ FPYEETEDQL RCIKEIKEDM EKDRPMDRLL CGDVGYGKTE
VALRAAFKAV ADGKQVAFLC PTTILAYQHY ANFIERFKEF PVKIEMLSRF RTPKEQSKII
KELAEGNIDI IVGTHRLLQN DIKFKDLGLL IIDEEQRFGV VHKEKIKKLK ENIDVLTLSA
TPIPRTLHMS LIGIRDMSVL ENPPEDRFPV ETYVVEFNEE LIKDAILREI ARGGQVYFVY
NRVNGIEKMA SFVKDLVPGC RVAVAHGQME ESQLEKVMID FLNGEYDVLV STTIIETGLD
IPNVNTIIVY DADKLGLSQL YQLRGRVGRS NRLAYAYFTY RKDKVLSEVA EKRLEAIKEF
TEFGSGFKIA MRDLEIRGAG NLLGAEQHGH IDAIGYDLYL KLLEEAIRNL KGEAPKEEIT
TTIDIKVNAY IDSSYIEDEN LRLEMYKKIA SIKSREDMIE ISEELVDRFG DYPKPVEALL
EIAYLKAIAS QVNITEITEK GNSVILKFND MNLVNMEVIE KVIKEYGGNL VFSSQVQPYL
TYKFNKKETL QKELIELVEK IKSLQ
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