Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Teth514_0199 |
Symbol | |
ID | 5876029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoanaerobacter sp. X514 |
Kingdom | Bacteria |
Replicon accession | NC_010320 |
Strand | + |
Start bp | 201907 |
End bp | 202599 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641540541 |
Product | ABC transporter related |
Protein accession | YP_001661853 |
Protein GI | 167038868 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | [TIGR03608] putative bacteriocin export ABC transporter, lactococcin 972 group |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAGTG TTTTGATAAA AATAAGGAAT TTAACAAAGA TTTACAAAAT GGGGGAAAAT GAAGTAAGAG CGTTAGATGG TATAAACCTT GACATTGAAA AAGGAGAATT TGTCTCAATT GTTGGTCAAT CAGGTTCAGG CAAAACCACT TTAATGAACA TAATAGGCTG TTTAGATGTA AAAACTTCTG GAGAATATTT TTTAAATGGC ATAGATACAA GTAAACTTTC TGACAATCAA TTAGCAGATT TAAGATGTAG TGAAATAGGG TTTGTTTTTC AAAATTTCAA TTTGCTTCAA AAAATGACGG CTTTAGAAAA TGTGGAATTG CCTATGATAT ACAAAGGTGT GCCTACAAAA GAAAGGCGGC AAAGAGCGGA GATGCTTTTA GAGATGGTAG GACTTAAGGA AAGGATGCAC CATAGACCTA ATGAATTATC AGGAGGTCAG CAACAAAGAG TAGCAATAGC AAGGGCACTA GCAAATAATC CCCATCTCAT ATTGGCAGAT GAACCAACGG GAAACTTAGA CTCAAAAAGT GGTAGTGAGA TAATGAAAAT AATAAAAGAG TTAAACGAGA GAGGAAATAC AGTAGTACTC ATAACGCATG ATCCTAATAT AGCTGCACAA GCCAAAAGAA TAGTAAGAAT AAAAGATGGG CGCATTTTAG AAAACGAGGT GGTAACACCG TGA
|
Protein sequence | MDSVLIKIRN LTKIYKMGEN EVRALDGINL DIEKGEFVSI VGQSGSGKTT LMNIIGCLDV KTSGEYFLNG IDTSKLSDNQ LADLRCSEIG FVFQNFNLLQ KMTALENVEL PMIYKGVPTK ERRQRAEMLL EMVGLKERMH HRPNELSGGQ QQRVAIARAL ANNPHLILAD EPTGNLDSKS GSEIMKIIKE LNERGNTVVL ITHDPNIAAQ AKRIVRIKDG RILENEVVTP
|
| |