| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Teth514_0020 |
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| Symbol | |
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| ID | 5877769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoanaerobacter sp. X514 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010320 |
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| Strand | + |
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| Start bp | 24174 |
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| End bp | 25256 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641540359 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001661680 |
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| Protein GI | 167038695 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAAGAAT ATATGAAAAG GGCTTTAACG CTGGCTAAAA AAGGATGGGG ATACACAAAC
CCTAATCCAC TTGTGGGTGC TGTAATAGTT AAAAATGGAA AAATAATAGG TGAGGGTTAT
CATGAATATT TTGGAGGGCC ACATGCTGAA GTAAATGCAT TAAAAAATGC AGTTGAAAAT
GTTGAAGGTT CTACTATGTT TGTAACACTT GAACCTTGCA GCCATTATGG CAAAACGCCT
CCTTGTGTTG AAGAAATAAT TAAATCTGGC ATTAAGAGAG TGTATATAGC GATGGAAGAC
CCAAATCCTA AGGTTAGCGG GAACGGTATA AAAAGGTTAA AAGAGGCGGG AATAGAAGTA
CATGTGGGGA TGATGGAGAA AGAAGCGAGG AAACTCAACG AAATATTTGT TAAATATATT
ACGACAAAAT TCCCCTTTGT GATATTAAAA TCTGCTATGA GTATTGATGG TAAGATTGCT
TGTTATAATG GAAATTCTAA ATGGATTACA AATGAGAAAT CAAGAAAATT TGCTCATAAA
ATAAGAGGAC GGGTATCCGC CATTATGGTT GGGGTAAATA CAGTAATTAA GGATAACCCA
ATGCTTACAA CAAGGTTGGA GGGGTATAAA AATCCTGTAA GGATTATTGT GGATAGTAGA
GGTAGAATTC CACTTGACTC AAATGTAATA AGAGACAAAA CGGCAAAAAC GATAATTGCT
ACAACAGAAC TTATGCCAAA CAATGTGAGA AAGAAGCTTG AAGATATGGA TATTGAAGTT
ATTATATTAA AGAACGACAA TGGAAAAGTA CCTTTAAAAG AGCTAATGAT AAAACTTGGA
GAGAGGGGGA TTGATAGTGT ATTGATTGAA GGCGGTGGGA CATTAAATTG GTCTGCACTT
AAAGAGGGAA TTGTTGATAA AGTTATGTTT TTTATATCAC CTAGAATAAT AGGAGGAAAA
AATGCTTTAA CACCTGTAGA AGGTATAGGT TTTTCGGATA TAGGAAATTC AATAGAATTA
AAAGATGTGG AGATTGATAG AATAGATGAT GATATACTAA TAACAGCATA TGTAAGAAAG
TAG
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| Protein sequence | MEEYMKRALT LAKKGWGYTN PNPLVGAVIV KNGKIIGEGY HEYFGGPHAE VNALKNAVEN
VEGSTMFVTL EPCSHYGKTP PCVEEIIKSG IKRVYIAMED PNPKVSGNGI KRLKEAGIEV
HVGMMEKEAR KLNEIFVKYI TTKFPFVILK SAMSIDGKIA CYNGNSKWIT NEKSRKFAHK
IRGRVSAIMV GVNTVIKDNP MLTTRLEGYK NPVRIIVDSR GRIPLDSNVI RDKTAKTIIA
TTELMPNNVR KKLEDMDIEV IILKNDNGKV PLKELMIKLG ERGIDSVLIE GGGTLNWSAL
KEGIVDKVMF FISPRIIGGK NALTPVEGIG FSDIGNSIEL KDVEIDRIDD DILITAYVRK
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