Gene BcerKBAB4_5245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_5245 
Symbol 
ID5845486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp5226079 
End bp5226726 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content34% 
IMG OID641380369 
Producthemolysin III family channel protein 
Protein accessionYP_001648017 
Protein GI163943133 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTTT ATGTAAGAGA ACCGGTTAAT GCATTTACTC ACTTAGGAGG AGCTGTATTA 
TCATTTATTG CATTATTAGC TATGCTTGTG AAAGTTTCTG TTAAGATGCC ATCTGTTGCT
GCAATTACAG CTGTTATTTT ATTCGGTATC GGGATGATGG TCCTTTATAT GGCATCAGCT
GTGTATCATA GTGTCGTAGC CAGTGAACGT GTTATTTATT TCTTTAGGAA GCTAGATCAT
TCTATGATTT TCATATTAAT TGCAGGTACA TATGCACCCT TTTGCTTAAT TACATTAAAT
TCGGCAAATG GTTTACTATT ATTTTGTTTA GTTTATGCAA CGGCAATTTG TGGTATTGCT
TTTAAAATGT TTTGGTTTAA TTGTCCAAGA TGGTTATCGA CAGCAATTTA TCTTCTGATG
GGTTGGTTAA TTGTTCTATT CTTTGCACCG CTAGCTGAGA ATCTAAGTAC AGGAGGTATT
ATTTTCTTAG TACTTGGAGG CATTTTTTAT ACAATTGGTG GGTTTATTTA CGGTGCGAAG
CCAAAATGGT TGGAGTTTAA ATATATGGGA CACCATGAAA TTTTTCATGT TTTTGTATTG
TTAGGTAGTC TTGCGCATTT TCTAAGTGTA TATTGTTACG TAATTTGA
 
Protein sequence
MNVYVREPVN AFTHLGGAVL SFIALLAMLV KVSVKMPSVA AITAVILFGI GMMVLYMASA 
VYHSVVASER VIYFFRKLDH SMIFILIAGT YAPFCLITLN SANGLLLFCL VYATAICGIA
FKMFWFNCPR WLSTAIYLLM GWLIVLFFAP LAENLSTGGI IFLVLGGIFY TIGGFIYGAK
PKWLEFKYMG HHEIFHVFVL LGSLAHFLSV YCYVI