Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_5245 |
Symbol | |
ID | 5845486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | - |
Start bp | 5226079 |
End bp | 5226726 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641380369 |
Product | hemolysin III family channel protein |
Protein accession | YP_001648017 |
Protein GI | 163943133 |
COG category | [R] General function prediction only |
COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTTT ATGTAAGAGA ACCGGTTAAT GCATTTACTC ACTTAGGAGG AGCTGTATTA TCATTTATTG CATTATTAGC TATGCTTGTG AAAGTTTCTG TTAAGATGCC ATCTGTTGCT GCAATTACAG CTGTTATTTT ATTCGGTATC GGGATGATGG TCCTTTATAT GGCATCAGCT GTGTATCATA GTGTCGTAGC CAGTGAACGT GTTATTTATT TCTTTAGGAA GCTAGATCAT TCTATGATTT TCATATTAAT TGCAGGTACA TATGCACCCT TTTGCTTAAT TACATTAAAT TCGGCAAATG GTTTACTATT ATTTTGTTTA GTTTATGCAA CGGCAATTTG TGGTATTGCT TTTAAAATGT TTTGGTTTAA TTGTCCAAGA TGGTTATCGA CAGCAATTTA TCTTCTGATG GGTTGGTTAA TTGTTCTATT CTTTGCACCG CTAGCTGAGA ATCTAAGTAC AGGAGGTATT ATTTTCTTAG TACTTGGAGG CATTTTTTAT ACAATTGGTG GGTTTATTTA CGGTGCGAAG CCAAAATGGT TGGAGTTTAA ATATATGGGA CACCATGAAA TTTTTCATGT TTTTGTATTG TTAGGTAGTC TTGCGCATTT TCTAAGTGTA TATTGTTACG TAATTTGA
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Protein sequence | MNVYVREPVN AFTHLGGAVL SFIALLAMLV KVSVKMPSVA AITAVILFGI GMMVLYMASA VYHSVVASER VIYFFRKLDH SMIFILIAGT YAPFCLITLN SANGLLLFCL VYATAICGIA FKMFWFNCPR WLSTAIYLLM GWLIVLFFAP LAENLSTGGI IFLVLGGIFY TIGGFIYGAK PKWLEFKYMG HHEIFHVFVL LGSLAHFLSV YCYVI
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