| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_5168 |
|---|
| Symbol | |
|---|
| ID | 5845409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | + |
|---|
| Start bp | 5143871 |
|---|
| End bp | 5145922 |
|---|
| Gene Length | 2052 bp |
|---|
| Protein Length | 683 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641380293 |
|---|
| Product | 1A family penicillin-binding protein |
|---|
| Protein accession | YP_001647941 |
|---|
| Protein GI | 163943057 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAAA CTATGAATCC AAAACTTAAA AAATATAAAC GTCTTTTCTT CACCGTAATG
TTTTCTTGTG TTCTTTTTTT CGTTTTTTCC TTTTTTATTA TCATTATAGC TGCAAAAATT
ATGGGGCCTC CCCCTGTTGC AGTGCCGCAA ACGAGTGTCT TTTACGCTAA TGATGACACT
GTTATAGGAC AAAGTAATGA AACACAAAAG CGCTATAATG TATCTCTTGA TGAAATTTCT
CCTTATGTAA AAGAGGCAAC ACTATCTATT GAAGATCAAC GATTCTACAA ACATCATGGA
TTTGATATAA AGCGCATTGT TGGTGCCATT GTTGCCGATT TAAAAGCAAT GGCAAAAGTA
CAAGGTGCTA GTACTATTAC ACAACAGTAT GCTCGTAACC TATACTTAGA TCATGATAAA
ACGTGGAAGC GTAAACTATT AGAGGCAATG TATACCGTTC GCCTTGAAGT GAACTATAAT
AAAAATCATA TTTTAGAAGG ATATTTAAAT ACAATTTATT ACGGGCATGG TGCTTACGGA
ATCGAAGCTG CTTCTCGCCT GTATTTCGAT AAAACTGCAA AAGAATTAAC ATTAGCAGAA
GCTAGTATGC TCGCAGGCAT TCCGAAAGGA CCTAGCTTTT ACTCTCCCTT TTTAAAAGAG
GAGCGTGCTA AAGGGCGTCA ATCTCTCATA CTAGATGAAA TGGTAGAACA AGGTTATATT
ACAAAACAGC AAGCTGCCTC GGCAAAAAAG GAACCGCTAA CTTTCGCCTC ATTAGATACG
AAAAAAGTGG CAGAGGTCGC ACCTTATTTC CAAGATGCTG TACAAGCTTC TCTTCTTCGG
GATATCGGAT TAGATGAGCA AGCCTTACAG CGAGGTGGCT TACGTATTTA TACAACGCTA
GACCCTAAAT TACAATCTGT AGCAGAGCAA GCTGTAAAAA ATCATATACC TGAAACAACA
AACATCCAAA CTGCCCTCGT CTCTATGAAT CCAAAAACGG GTGAAGTGGC TGCCCTTGTT
GGTGGAACTG ATTATAATAC GAGTCAATTT AACAGAGCTA CACAAGCCGC TCGTCAGCCC
GGCTCTACAT TTAAGCCATT CCTATATTAC GCAGCCTTAG AACGAGGATT CACCCCTGCT
ACGCGCTTAA AAAGCGAATA CACTGTATTC ACTTTAGGTG ACGGTGTTTC CAAATATAAA
CCGAAAAATT ATAAAAACTA TTATGCAGAC GACTTTGTGA CAATGGCACA AGCACTCGCT
GTTTCTGATA ACGTATATGC TGTGAAGACA AATCTATTTT TAGGCGAAGA CATTCTTACA
AAAACAGCGA AGCAATTCGG TATTACTAGC GCATTAAAAG ATGTTCCGTC TCTTGCTCTC
GGCACATCTC CTGTAAAACC AATTGAAATG GTCAATGCTT ATAGCATGTT TGCAAACGGC
GGGAAAGAAG TAAAACCAAT CTTTATAAGG CGCATCGTTG ATCATGAAGG AAATATGCTA
TACGACGCTC ATTTAGAAAG TAAACAAGTT CTAGATAAAA GCAAAGCCTT TGTGATGGAA
GAAATGATGG CAGGTATGTT TAATAAAAAA CTAAGCAGTT ATGCCGCTGT GACCGGTCAA
TCGATGTTAT CAAAACTATC AAGAACATAT GCTGGAAAGT CTGGTTCTAC AGAAACTGAT
AGTTGGATGA TTGGATTTAC CCCGCAGCTC GTAACAGGGG TTTGGATTGG ATACGATCAA
CCTAAATCCA TTTCAAACGT AGCAGAACAA GGATACGCAA AAAAAATATG GACCGATACA
ATGGAAAAAG GATTAGATGG ACAGCCTAAA CAAGAGTTCA AACAACCAGC AGATGTTGTT
GCAGTCGATG TTAATCCTGA AAACGGTAAG ATTGCTACAA AAAATTGTCC CATTTCTGTG
AAAATGTATT TCGCAAAAGG TACAGAGCCA ACAGAGTATT GTATGGATCA CGTTGATGAT
AAGGAAGAGT TCGAAAAGGT TAGTGAAGAG AAGAAAAAGG CGGGTTGGTG GAAAAAATAT
CTCCCGTGGT AA
|
|---|
| Protein sequence | MDQTMNPKLK KYKRLFFTVM FSCVLFFVFS FFIIIIAAKI MGPPPVAVPQ TSVFYANDDT
VIGQSNETQK RYNVSLDEIS PYVKEATLSI EDQRFYKHHG FDIKRIVGAI VADLKAMAKV
QGASTITQQY ARNLYLDHDK TWKRKLLEAM YTVRLEVNYN KNHILEGYLN TIYYGHGAYG
IEAASRLYFD KTAKELTLAE ASMLAGIPKG PSFYSPFLKE ERAKGRQSLI LDEMVEQGYI
TKQQAASAKK EPLTFASLDT KKVAEVAPYF QDAVQASLLR DIGLDEQALQ RGGLRIYTTL
DPKLQSVAEQ AVKNHIPETT NIQTALVSMN PKTGEVAALV GGTDYNTSQF NRATQAARQP
GSTFKPFLYY AALERGFTPA TRLKSEYTVF TLGDGVSKYK PKNYKNYYAD DFVTMAQALA
VSDNVYAVKT NLFLGEDILT KTAKQFGITS ALKDVPSLAL GTSPVKPIEM VNAYSMFANG
GKEVKPIFIR RIVDHEGNML YDAHLESKQV LDKSKAFVME EMMAGMFNKK LSSYAAVTGQ
SMLSKLSRTY AGKSGSTETD SWMIGFTPQL VTGVWIGYDQ PKSISNVAEQ GYAKKIWTDT
MEKGLDGQPK QEFKQPADVV AVDVNPENGK IATKNCPISV KMYFAKGTEP TEYCMDHVDD
KEEFEKVSEE KKKAGWWKKY LPW
|
|---|
| |