Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_4934 |
Symbol | |
ID | 5845175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | - |
Start bp | 4897907 |
End bp | 4899271 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641380061 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_001647710 |
Protein GI | 163942826 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGATTC TCCTTTTACC AAACTTATTG TACAATAGAA ACAAGGGGGA GATTAGTTTG AAGGCAAGTC TTTTACAAGA ACAAAGCTTA CGTTTGGCAA TGACACAAGA GTTAAGGCAA GCGATTACAA TGCTCCAGTA TAATGTACAA GAATTATCGG AGTTTTTGTA TGAGCAATCG TTAGAGAATC CCCTTATTGA GTTAGGTGGT TTTGAGAGGG AGAAGAAAAA GAGCTCTAAC ACAAGTAAAA GTACCCGCAA ACAAGTCGAG AATCAAATGG AAATCTACAG TGTGGATTCT ACAACGATTC AGCAACATTT ATTAAATCAA CTACAGTATT ATAAAATAGA TGAAGAAGAG CGAAAAGCAG CTTCTTTCAT TATTATGAAC ATGGATGGAA ATGGCTATTT ACAAGAAACA AATGAAGAGT TATCAGAGCT TCTTTCTGCG CCAATTGATG TAGTGGACTG TTCCGTGGAG CTTGTTCAAT CGTTAGAGCC AGCAGGGGTA GGTGCGCGTA ATATTCAGGA ATGTCTATCA ATCCAATTGA AGCGCTTACA AAGAAGGAAT GGGTTAGCGG AAGAAATTAT AGATGATCAT TTTAATTATT TCGTTAAGAA AGATTGGCGA AAGCTCGTTC AAGTGTTGAA GTGTACCAAC GAGGAATTAC AGGATGCGGT GAACTGTATT ACATCATTGC AGCCGAAACC AGGTCTTGCA TTTTCTTCTG ATAAACCACT TTATATTGTG CCTGATATGG CGGTAAAAAA AGATGGCGAT CATCTCGTTT TACAGATGAA TGAGAGAAAT ATGCCAAGAA TTGAAATTCA CTCTGAGTAT AGTGCGTTAC TAAATAATAG TGAAAGTGAA GTGGCTTCTT ACGTATCGGA GAAGTATCAG CATGTGCAAT GGATTATGCG CAGTTTGAAA CAGAGAAAAC AAACACTCTT ACAAGTGATG AATATTATTA TGGAAAAACA GCATGATTTC TTCTGGGGAG GTCCAGAGTA TTTAAAACCA CTTGCATTAA AAGAGGTGGC GGAAGAGTTA GGTGTGCATG AGTCTACAAT TAGTCGTGCA ACGCGTAATA AATATGTGCA AACGCCGTAC GGTTTATTTG AGATGAAATC ATTCTTTAGT AATTCTATTT CTACGACGGA AGATGAGGCG GTTTCTACAA AGCGTGTGAA ACAATTCATT CAAACGCTTG TTGGAGCAGA AAATAAGAAA AAGCCACTTT CGGATCAAAA GATTTCAAAA TTATTAGAAG AAGAGCATGA AATCGTTATT TCTCGAAGAA CGGTTGCGAA GTATAGAGAA CAAATGCATA TTCCTGCTTC GTCTCTAAGA AAAACAATTG GATAG
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Protein sequence | MRILLLPNLL YNRNKGEISL KASLLQEQSL RLAMTQELRQ AITMLQYNVQ ELSEFLYEQS LENPLIELGG FEREKKKSSN TSKSTRKQVE NQMEIYSVDS TTIQQHLLNQ LQYYKIDEEE RKAASFIIMN MDGNGYLQET NEELSELLSA PIDVVDCSVE LVQSLEPAGV GARNIQECLS IQLKRLQRRN GLAEEIIDDH FNYFVKKDWR KLVQVLKCTN EELQDAVNCI TSLQPKPGLA FSSDKPLYIV PDMAVKKDGD HLVLQMNERN MPRIEIHSEY SALLNNSESE VASYVSEKYQ HVQWIMRSLK QRKQTLLQVM NIIMEKQHDF FWGGPEYLKP LALKEVAEEL GVHESTISRA TRNKYVQTPY GLFEMKSFFS NSISTTEDEA VSTKRVKQFI QTLVGAENKK KPLSDQKISK LLEEEHEIVI SRRTVAKYRE QMHIPASSLR KTIG
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