| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_4393 |
|---|
| Symbol | |
|---|
| ID | 5844608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | - |
|---|
| Start bp | 4396720 |
|---|
| End bp | 4397484 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641379505 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_001647180 |
|---|
| Protein GI | 163942296 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000250925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA TTGATTCAGT ACAAAACCCG CGTGTGAAGC AGTGGAAAAA GCTGCAGACG
AAAAAAGAGC GCGATAACAA AGCTTTATTT TTTGTAGAAG GATTCCATTT AGTAGAGGAA
GCGTTAAAGG CAGGAGTTGT AACAGAACTT ATCGTTTCAG ATCAGACAGA TCTTCCGAAA
GATTGGACAG TTAATGATGT TGAAATGTAT ATTGTGCCTG AAGCAATTGT AAAAGTACTT
CGCGAAACAG AAACAACGCA AGGTGTATTT GCTGTTTGTG AGAAACATGA GAAAGAAGTA
GCTCTTACTG ATGGGAAATT TCTTTTATTA GACGGCCTTC AAGACCCAGG TAATTTGGGA
ACGATTATTC GTACAGCGGA TGCAGCGGGT ATTCATGCCG TTGTGCTTGG AGAAGGGTGC
GTTGATGTTT ATAATAGTAA AGTACTACGA TCTACACAAG GTTCTATTTT CCACTTACCG
GTTGTGAAAG GGAACTTAGA AGAATGGGTA GACAAGTTAA AAGAAAATAA CGTCCCTGTA
TATGGAACAG CTCTTGAAAA TGGAGTTCCA TTTGGTGAAG TAACCCCGGC TGGAAGTTTT
GCATTAATTG TAGGGAATGA AGGAAGCGGC GTACGCCAAG AAATTCTTGC GAAAAGTGAT
CAAAACTTGT ATATTCCGAT TTACGGCGGG GCAGAATCAT TAAATGTTGC GGTTGCAGCA
GGGATTTTAA CGTATTATTT ACAAAGCCCA GTTGCGAATC GATAA
|
|---|
| Protein sequence | MKNIDSVQNP RVKQWKKLQT KKERDNKALF FVEGFHLVEE ALKAGVVTEL IVSDQTDLPK
DWTVNDVEMY IVPEAIVKVL RETETTQGVF AVCEKHEKEV ALTDGKFLLL DGLQDPGNLG
TIIRTADAAG IHAVVLGEGC VDVYNSKVLR STQGSIFHLP VVKGNLEEWV DKLKENNVPV
YGTALENGVP FGEVTPAGSF ALIVGNEGSG VRQEILAKSD QNLYIPIYGG AESLNVAVAA
GILTYYLQSP VANR
|
|---|
| |