| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_4254 |
|---|
| Symbol | |
|---|
| ID | 5844467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | - |
|---|
| Start bp | 4248608 |
|---|
| End bp | 4250791 |
|---|
| Gene Length | 2184 bp |
|---|
| Protein Length | 727 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641379364 |
|---|
| Product | (p)ppGpp synthetase I, SpoT/RelA |
|---|
| Protein accession | YP_001647041 |
|---|
| Protein GI | 163942157 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00950275 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATG AGCAAGTACT AACAGCTGAA CAGGTACTCG AGAAAGCAAG TCAATATTTA
GCGGATGGAG ATATTGAGCT AGTGGCACGT GCCTATGAAT ATGCGCGTGA TGCACATAGC
GAACAATATA GAAAATCGGG TGAACCATAT ATTATTCACC CAATTCAAGT TGCAGGTATT
TTAGTTGATT TACACATGGA TCCGGCTACA GTATCGGCAG GTTTCTTACA TGATGTAGTG
GAAGATACAG AAATTACATT AGAAGACATT GAACGGGAAT TTAATAAAGA AATCGCTATG
CTTGTCGATG GTGTTACAAA GCTTGGAAAG ATTAAATATA AATCCCATGA GCAGCAACAA
GCAGAAAACC ATCGCAAAAT GTTTATTGCA ATGGCTCAAG ATATTCGAGT TATTTTAATT
AAACTAGCTG ATCGTCTTCA TAACATGCGT ACATTGAAAC ATTTGCCTCA AGAGAAGCAG
CGTCGCATTG CGAATGAAAC GTTAGAAATC TTTGCACCTT TAGCACATAG ACTCGGAATT
AGTACTATTA AATGGGAGTT AGAGGATACG TCACTTCGCT ATTTAAACCC GCAGCAATAT
TATCGTATTG TGAATTTAAT GAAGCGTAAA CGTGCAGAGC GTGAAGAATA TTTAGATGAA
GTAATGACTG GCATTCGTGA GAAATTAAAA GAGGTTTCAA TTCAACCTGA GATTTCTGGA
AGACCAAAAC ATATTTACAG TATTTATCGT AAAATGGCAT TGCAAAATAA ACAATTCAAT
GAAATTTACG ATTTACTAGC TGTACGTGTC GTTGTGAATA GTATTAAAGA TTGCTATGCG
GTGCTTGGAA TTATTCATAC GTGCTGGAAA CCAATGCCAG GTCGTTTTAA AGATTATATT
GCAATGCCGA AAGCAAATTT ATATCAATCT CTTCATACGA CTGTAATTGG ACCAAAAGGT
GATCCGCTAG AAGTGCAAAT TCGTACGAAA GAAATGCATG AGATTGCAGA ATTCGGAATC
GCGGCACATT GGGCGTATAA AGAAGGTAAA GCAGCAGAAA CAACGGGTAC ATTAGAGAAG
AAACTAACTT GGTTCCGTCA AATATTAGAA TGGCAAAATG AAGCTTCTAA TGCAGAAGAA
TTTATGGAGT CATTAAAAAT TGATTTATTC TCTGACATGG TATTCGTCTT TACACCAAAA
GGCGATGTAA TGGAATTACC ACTTGGCTCT GTTCCAATTG ATTTTTCGTA TCGTGTCCAT
TCGGAAATTG GAAACAAGAC AATTGGTGCA AAAGTAAATG GGAAAATGGT GACGCTTGAT
TATAAGTTGA AAACTGGTGA CATCATTGAA ATTTTAACAT CGAAACATTC GTATGGTCCA
AGTCAAGATT GGGTAAAGCT TGCTCAAACA TCTCATGCGA AAAATAAAAT ACGTCAATTC
TTTAAGAAAC AACGTAGAGA TGAAAATATT GAAAAAGGCC GTGAACTTGT TGAAAAAGAA
GTGCGTGGCT TAGAGTATGA GATGAAAGAA GTATTAGCGC TTGATAATTT AAAACGTGTC
GCTGAGAAGT TTAACTTTGC AAATGAAGAA GATATGTTTG CAGCAGTTGG ATATAACGGA
ATTACAGCAG CGCAAATTGT TACGAGACTA ACGGACAAGT TCCGTAAACA ACGTGAAGAA
GAAGACATCG TTGAAGTTAA AGAAGTTCGT AAACCGATGA AAATTCGAAA ATGGGATTCT
GGTGTAAAGG TAAGTGGTGC AGATAATTTA TTAATTCGTT TATCAAAATG CTGTAACCCA
GTTCCAGGTG ATGATATCGT TGGGTATATT ACGAAAGGTC GAGGCGTATC AATTCACCGT
TGCGATTGCG TCAATGTGCA TACAGAAGAA GCGGTGGAGC GTTTACTAGA AGTAGATTGG
GAAGGTAGTC CTGAAAAAGA AATTGAGTAC AATGTTGATA TTGAAATTTC AGGCTATGAT
CGTCGTGGTC TATTGAATGA AGTATTACAA GCTGTTACAG AAACGAAGAC GTATATCTCT
GCTGTTTCTG GTAGAAGTGA TCGTAATAAG ATGGCAACGA TTAACATGTC GATTTCTATT
CGAAACTTAC AACACTTGAA AAAAGTAGTA GAGCGCATTA AACGTGTTCC AGAAATTTAT
GCCGTACGAC GCATGATGCA TTAA
|
|---|
| Protein sequence | MANEQVLTAE QVLEKASQYL ADGDIELVAR AYEYARDAHS EQYRKSGEPY IIHPIQVAGI
LVDLHMDPAT VSAGFLHDVV EDTEITLEDI EREFNKEIAM LVDGVTKLGK IKYKSHEQQQ
AENHRKMFIA MAQDIRVILI KLADRLHNMR TLKHLPQEKQ RRIANETLEI FAPLAHRLGI
STIKWELEDT SLRYLNPQQY YRIVNLMKRK RAEREEYLDE VMTGIREKLK EVSIQPEISG
RPKHIYSIYR KMALQNKQFN EIYDLLAVRV VVNSIKDCYA VLGIIHTCWK PMPGRFKDYI
AMPKANLYQS LHTTVIGPKG DPLEVQIRTK EMHEIAEFGI AAHWAYKEGK AAETTGTLEK
KLTWFRQILE WQNEASNAEE FMESLKIDLF SDMVFVFTPK GDVMELPLGS VPIDFSYRVH
SEIGNKTIGA KVNGKMVTLD YKLKTGDIIE ILTSKHSYGP SQDWVKLAQT SHAKNKIRQF
FKKQRRDENI EKGRELVEKE VRGLEYEMKE VLALDNLKRV AEKFNFANEE DMFAAVGYNG
ITAAQIVTRL TDKFRKQREE EDIVEVKEVR KPMKIRKWDS GVKVSGADNL LIRLSKCCNP
VPGDDIVGYI TKGRGVSIHR CDCVNVHTEE AVERLLEVDW EGSPEKEIEY NVDIEISGYD
RRGLLNEVLQ AVTETKTYIS AVSGRSDRNK MATINMSISI RNLQHLKKVV ERIKRVPEIY
AVRRMMH
|
|---|
| |